| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3124 |
|---|
| Symbol | |
|---|
| ID | 6517310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3019820 |
|---|
| End bp | 3020602 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642748139 |
|---|
| Product | tRNA pseudouridine synthase C |
|---|
| Protein accession | YP_002115916 |
|---|
| Protein GI | 194734776 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.756442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGA TCCTCTATCA AGACCAGTGG CTGGTTGCCG TGAATAAACC CGCAGGCTGG
CTTGTTCACC GGAGCTGGCT GGATCGCGAC GAAAAAGTCG TGGTCATGCA AACGGTGCGC
GACCAAATCG GCCAGCATGT TTTTACCGCC CACCGTCTCG ACAGACCCAC GTCGGGCGTA
CTGTTAATGG GGCTGTCCAG CGAAGCGGGA CGCCGTCTGG CGCAGCAGTT CGAGCAGCAC
CACATCCGTA AACGCTACCA TGCCATTGTG CGCGGCTGGC TGATGGATGA CGCAGTACTG
GATTATCCGC TGGTGGAAGA GCGCGATAAA ATTGCTGATA AATTCGCCCG CGAGGATAAA
GCGCCCCAGC CGGCTGTAAC GCAGTATCGC GGACTGGCGA CGGTCGAAAT GGCGGTGCCG
ACCGGACGTT ATCCCACCAC GCGTTATGGT CTGGTTGAGC TGGAACCAAA AACGGGACGC
AAGCACCAGC TTCGTCGTCA TCTGGCGCAT CTGCGTCATC CTATCATCGG CGACAGCAAG
CATGGCGATT TGCGACAAAA CCGCAGCGCC GCAGAGCATT TTGCCTGTCG TCGCCTGATG
CTTCATGCCA GTCGGCTTGA ACTGACGCAC CCCTTCACCG GACAGCCGTT GATGATTCAG
GCCGGGTTGG ATGAAACCTG GATGCAGGCG CTGACACAGT TTGGCTGGCG TGGACTTCTC
CCTGACAATG AAAGGGTTGA GTTTACGGCG GCGTCCCGGC AGGATGAGAC TCATCAGGCA
TAA
|
|---|
| Protein sequence | MLEILYQDQW LVAVNKPAGW LVHRSWLDRD EKVVVMQTVR DQIGQHVFTA HRLDRPTSGV
LLMGLSSEAG RRLAQQFEQH HIRKRYHAIV RGWLMDDAVL DYPLVEERDK IADKFAREDK
APQPAVTQYR GLATVEMAVP TGRYPTTRYG LVELEPKTGR KHQLRRHLAH LRHPIIGDSK
HGDLRQNRSA AEHFACRRLM LHASRLELTH PFTGQPLMIQ AGLDETWMQA LTQFGWRGLL
PDNERVEFTA ASRQDETHQA
|
|---|
| |