Gene SeSA_A3095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3095 
Symbolcse4 
ID6519348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2985446 
End bp2986504 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID642748114 
Productcrispr-associated protein, Cse4 family 
Protein accessionYP_002115891 
Protein GI194734074 
COG category 
COG ID 
TIGRFAM ID[TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0478447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTT TTATTCAACT GCATTTATTG ACTGCTTATG CGCCCGCTAA CCTGAACCGT 
GATGACTCTG GGCGACCGAA AACAGCGTAT ATGGGCGGCG TAGAGCGTCT GCGCGTATCA 
TCGCAAAGCC TGAAACGCGC CTGGCGCGTA TCGGAAACCT TTGAAGGCGC GATGGATGGA 
TTTATGGGTA AGCGTACTCG TCGAATTGGC GTGGATTATG TTTATCGTCC GATGATTGCC 
GCTGGCGTTA CCGGGAAAAT AGCGAAAAGC GCAGCGGAGA AAATTGCTGC GCAATTTGGC 
AAGTTAAAGA GTGATAAAAA TGCGCCCGAA GAAAAAAATC TCGAAATTGA GCAGATCGTT 
CACGTCAGTA ACCATGAAAT TAGTTTGATT AAACAACTGG TTGATACACT GATCGCTGAC 
AAACGCGAAC CTAACGATGA AGAAGTGAAG CTTTTGCGCA AAGAGCAGCG TAGCGTAGAT 
ATGGCGCTGT TTGGCCGTAT GCTGGCGTCA TCGCCTGAGT TCAACGTCGA GGCTGCTTGT 
CAGGTATCCC ATGCGTTGGG CGTAAGTGCC GTGACCGTTG AGTCTGATTT TTTCACCGCC 
GTTGACGATC TGAATAATAA AGAGGAAGAC GCAGGTTCCG GGCATATGGG CGAGCAGGGT 
TTTGCCTCGG CGCTTTTCTA TACCTATGTC TGTATCAGCC GCGATCTGCT GGTGGAAAAC 
CTGGGTGGTA ACGAAGAACT GGCGAAGCGT ACTATTGCGG CACTCACTGA AACAGCGTTA 
ACCGTCTCGC CAACCGGTAA ACAAAACAGC TTCGCTTCTC GTGCCTATGC CACCTATGCG 
TTGGCCGAAG TCGGGCAAAA ACAACCGCGT TCTCTGGCGA CGGCATTTTT CCAGCCGGTA 
CGCGATACCG ATCAAATTCC TGCGGCAATA ACCCGTTTAA AACAGCAGCG CGCCAGCTTC 
GATAGCGTAT ACGGAAACTG TGCAGACGAT TATCGCGAGT TGAACGTTCA GGAAGGTACG 
GGATCTCTGG CGGAATTACT GGCCTTTGTT AGCCAGTAA
 
Protein sequence
MTTFIQLHLL TAYAPANLNR DDSGRPKTAY MGGVERLRVS SQSLKRAWRV SETFEGAMDG 
FMGKRTRRIG VDYVYRPMIA AGVTGKIAKS AAEKIAAQFG KLKSDKNAPE EKNLEIEQIV 
HVSNHEISLI KQLVDTLIAD KREPNDEEVK LLRKEQRSVD MALFGRMLAS SPEFNVEAAC 
QVSHALGVSA VTVESDFFTA VDDLNNKEED AGSGHMGEQG FASALFYTYV CISRDLLVEN 
LGGNEELAKR TIAALTETAL TVSPTGKQNS FASRAYATYA LAEVGQKQPR SLATAFFQPV 
RDTDQIPAAI TRLKQQRASF DSVYGNCADD YRELNVQEGT GSLAELLAFV SQ