Gene SeSA_A3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3062 
Symbol 
ID6516633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2959933 
End bp2960844 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content55% 
IMG OID642748084 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002115861 
Protein GI194737137 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.25979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATT TGCAGCGTAT GTCGCTGTTT ATCGCCGTGG TAGATAGCGG CAGCTTCACG 
GCCGCCGCCG CCGCATCGGG CCAAACAAAA GCGGTAGTGA GTTTTAATAT TCGGCAGCTT 
GAAAAAGAGC TTGGCGTAAC GTTACTGCTA CGTTCCACCC GACGATTGAC GCTCACAGAC 
GCCGGCGTCC TCTTTTACCA AAAAGGCGTG AATTTACTCA ATGCCGCGAA AAATTTGCAG 
GATGAAGTGC GTGCCAGCCA TAGTGGGCTG GGCGGCGAGT TACGTATTAC CACTACGCCC 
GAGTTTGGCG AACAGGTGGT CATTCCGGTA CTGGCGCAGT TTAGTCAGCG CCATCCCGAT 
CTCCGTATTC GGCATATGTC CTCATCACAT CATGCCGATT TAATTGCCGA GCGCTTTGAT 
GTGGCGATTC GGCTTGGCTC GCTGGCGGAC TCCCGCTATC GCGCCGCGCT GATATCCCGC 
TTTACCATTC TGCCGGTCGC CGCGCCGCAG TGGCTCGCCC GCCACCCCGT GTCGTCGCTG 
GAGTCGTTGG CTCAGGCGGA ATGGATTATT CATGAGCGAT TACCTACGCC GCTACGGTGG 
ACAGTAACGA ATAATCATGG CCAACACTCA CGCCTGGAGA TAAGCAAAGC CGGCAAAATT 
TCTGTCGACA GCGCGCGCTC GCTGATGGCC TTCGCTCTCG CGGGAAGCGG CGTCGCATTA 
CTGCCGCAAT GGTTAGTCAA CACCGCACTG GAGGATGGAA CGTTAATTCA CGTGTTACCC 
GACTATCATT TTCCCCGTCA GGGCATTTAT GCCGTTTATC CGGACGCCCG CCATGTATCG 
ACAAAAGTAC GCGCATTTAT TGATTTTTTA CGTTCGCAAT GGGATTGCGG GGAGCACGCC 
CCATCATTGT AG
 
Protein sequence
MLNLQRMSLF IAVVDSGSFT AAAAASGQTK AVVSFNIRQL EKELGVTLLL RSTRRLTLTD 
AGVLFYQKGV NLLNAAKNLQ DEVRASHSGL GGELRITTTP EFGEQVVIPV LAQFSQRHPD 
LRIRHMSSSH HADLIAERFD VAIRLGSLAD SRYRAALISR FTILPVAAPQ WLARHPVSSL 
ESLAQAEWII HERLPTPLRW TVTNNHGQHS RLEISKAGKI SVDSARSLMA FALAGSGVAL 
LPQWLVNTAL EDGTLIHVLP DYHFPRQGIY AVYPDARHVS TKVRAFIDFL RSQWDCGEHA 
PSL