Gene SeSA_A3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3042 
Symbol 
ID6519430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2940581 
End bp2940841 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content47% 
IMG OID642748064 
ProductEpaQ 
Protein accessionYP_002115841 
Protein GI194737177 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4794] Type III secretory pathway, component EscS 
TIGRFAM ID[TIGR01403] type III secretion protein, HrpO family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.230102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATT TAGTGTTTGC AGGTAATAAG GCGCTCTATC TTGTTTTGAT CCTGTCAGGG 
TGGCCGACGA TTGTCGCAAC GATTATCGGC CTCCTGGTAG GGTTATTCCA GACGGTAACG
CAATTACAGG AACAGACGCT GCCTTTTGGC ATTAAATTAC TTGGCGTGTG TTTATGCTTG
TTTTTACTCT CTGGCTGGTA TGGCGAAGTT TTACTCTCTT ACGGGCGTCA GGTGATATTC
CTGGCGTTGG CTAAGGGGTA A
 
Protein sequence
MDDLVFAGNK ALYLVLILSG WPTIVATIIG LLVGLFQTVT QLQEQTLPFG IKLLGVCLCL 
FLLSGWYGEV LLSYGRQVIF LALAKG