| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3040 |
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| Symbol | |
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| ID | 6516923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 2938729 |
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| End bp | 2939799 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642748062 |
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| Product | surface presentation of antigens protein SpaS |
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| Protein accession | YP_002115839 |
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| Protein GI | 194735131 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.110418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCGA ATAAAACAGA AAAACCGACT AAAAAACGGC TGGAAGACTC CGCTAAAAAA
GGCCAGTCAT TTAAAAGTAA AGATCTCATT ATCGCCTGCC TGACGCTGGG AGGAATTGCC
TATCTGGTGT CGTATGGCTC ATTTAATGAG TTTATGGGGA TAATTAAGAT CATTATTGCG
GATAATTTTG ATCAGAGCAT GGCTGACTAC AGTTTGGCCG TTTTTGGGAT AGGGTTAAAA
TATCTGATTC CATTTATGCT GCTCTGCTTA GTGTGTTCCG CATTACCGGC GTTATTACAG
GCCGGTTTTG TGCTGGCGAC AGAAGCATTA AAACCTAATT TATCGGCGTT AAACCCGGTA
GAAGGGGCGA AAAAACTTTT TAGTATGCGA ACGGTTAAAG ATACGGTCAA AACCCTACTG
TATCTCTCAT CCTTTGTGGT GGCCGCCATC ATTTGCTGGA AGAAATATAA GGTTGAAATC
TTTTCTCAGC TAAATGGCAA TATTGTAGGT ATTGCCGTCA TTTGGCGTGA GCTTCTCCTC
GCGTTGGTAT TAACTTGCCT TGCTTGCGCA TTGATTGTCT TATTATTGGA TGCTATTGCG
GAATATTTCC TGACCATGAA AGATATGAAA ATGGATAAGG AAGAAGTGAA GCGTGAAATG
AAGGAGCAGG AAGGGAACCC AGAGGTTAAA TCTAAAAGAC GTGAAGTTCA TATGGAAATT
CTGTCTGAAC AGGTGAAATC CGATATTGAA AACTCACGCC TGATTGTTGC CAACCCCACG
CATATTACGA TCGGGATTTA TTTTAAACCC GAACTGATGC CGATTCCGAT GATCTCAGTG
TATGAAACGA ATCAGCGCGC ACTGGCCGTC CGCGCCTATG CGGAGAAGGT TGGCGTACCT
GTGATCGTCG ATATCAAACT GGCGCGCAGT CTTTTCAAAA CCCATCGCCG TTATGATCTG
GTGAGTCTGG AAGAAATTGA TGAAGTTTTA CGTCTTCTGG TTTGGCTGGA AGAGGTAGAA
AACGCGGGCA AAGACGTTAT TCAGCCACAA GAAAACGAGG TACGGCATTG A
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| Protein sequence | MSSNKTEKPT KKRLEDSAKK GQSFKSKDLI IACLTLGGIA YLVSYGSFNE FMGIIKIIIA
DNFDQSMADY SLAVFGIGLK YLIPFMLLCL VCSALPALLQ AGFVLATEAL KPNLSALNPV
EGAKKLFSMR TVKDTVKTLL YLSSFVVAAI ICWKKYKVEI FSQLNGNIVG IAVIWRELLL
ALVLTCLACA LIVLLLDAIA EYFLTMKDMK MDKEEVKREM KEQEGNPEVK SKRREVHMEI
LSEQVKSDIE NSRLIVANPT HITIGIYFKP ELMPIPMISV YETNQRALAV RAYAEKVGVP
VIVDIKLARS LFKTHRRYDL VSLEEIDEVL RLLVWLEEVE NAGKDVIQPQ ENEVRH
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