Gene SeSA_A3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3030 
Symbol 
ID6518412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2928740 
End bp2929222 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content41% 
IMG OID642748053 
Productinvasion protein IagB 
Protein accessionYP_002115830 
Protein GI194736333 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0325324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTATT TTTTTATCAT CGTAATCTGG TTGCTTAGCA TAAATACGGC ATGGGCTGAT 
TGCTGGCTTC AGGCTGAAAA AATGTTCAAT ATTGAATCCG AACTACTTTA CGCTATCGCC
CAGCAGGAAT CGGCGATGAA ACCAGGCGCC ATTGGTTATA ACCGAGATGG TTCAACCGAT
CTTGGCCTGA TGCAAATTAA CAGCTTCCAT ATGAAAAGGC TGAAAAAAAT GGGGATTAGT
GAAAAACAGT TGTTACAGGA CCCCTGCATT TCTGTCATTG TGGGCGCATC CATTTTATCA
GATATGATGA AAATCTACGG TTATAGCTGG GAGGCCGTTG GCGCTTATAA TGCCGGGACG
TCACCGAAAC GATCGGATAT AAGGAAGCGT TATGCTAAAA AAATTTGGGA GAATTACAGA
AAATTAAAAG GGATGTCAGC AGAAGAGAAA AACAAAAGAC TTTCTATCGC GGTAAACAAA
TAA
 
Protein sequence
MHYFFIIVIW LLSINTAWAD CWLQAEKMFN IESELLYAIA QQESAMKPGA IGYNRDGSTD 
LGLMQINSFH MKRLKKMGIS EKQLLQDPCI SVIVGASILS DMMKIYGYSW EAVGAYNAGT
SPKRSDIRKR YAKKIWENYR KLKGMSAEEK NKRLSIAVNK