Gene SeSA_A3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3027 
SymboleprH 
ID6515251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2923548 
End bp2924612 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content50% 
IMG OID642748050 
Producttype III secretion apparatus protein PrgH/EprH 
Protein accessionYP_002115827 
Protein GI194736644 
COG category 
COG ID 
TIGRFAM ID[TIGR02554] type III secretion system protein PrgH/EprH 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0938119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0101686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGGTC AGAGTGATGC GCTCACTGCT TCAGGCCAAC TCCCTGATAT ACCTGCCGAT 
AGCTTTTTTA TCCCGCTGGA CCATGGCGGA GTAAATTTTG AAATCCAGGT GGATACGGAT 
GCGACCGAAA TTATACTCCA TGAGCTGAAA GAAGGAAATT CTGAATCTCG TTCGGTGCAA 
TTAAATACGC CAATACAGGT CGGTGAATTG CTTATCCTGA TTCGCCCGGA AAGCGAGCCG 
TGGGTGCCCG AGCAGCCTGA GAAGTTAGAA ACGTCTGCAA AAAAGAACGA GCCACGTTTT 
AAAAACGGAA TTGTAGCAGC ACTGGCCGGG TTTTTTATAT TGGGAATTGG GACGGTGGGG 
ACGTTATGGA TACTTAACTC GCCGCAGCGG CAGGCCGCAG AGCTCGATTC GTTATTGGGG 
CAGGAGAAGG AGCGCTTTCA GGTGTTGCCA GGACGGGACA AAATGCTCTA TGTCGCTGCG 
CAAAATGAAA GAGATACACT GTGGGCTCGT CAGGTTTTAG CGAGGGGCGA TTATGATAAA 
AATGCGCGAG TGATTAACGA AAACGAAGAA AATAAGCGTA TCTCTACCTG GCTGGATACC 
TATTATCCGC AGCTGGCTTA TTATCGGCTT CATTTCGATG AGCCGCGTAA ACCCGTTTTC 
TGGCTAAGCC GCCAGCGAAA CACGATGAGC AAGAAAGAGC TCGAGGTGTT AAGTCAAAAG 
CTGAGAGCGC TAATGCCTTA CGCGGATTCG GTTAACATCA CGTTGATGGA CGATGTTACC 
GCCGCAGGCC AGGCGGAAGC GGGGCTAAAA CAGCAGGCGT TACCTTATTC CCGCAGGAAT 
CATAAGGGGG GCGTAACGTT TGTTATTCAG GGGGCGCTCG ATGATGTAGA AATACTCAGA 
GCCCGTCAAT TTGTCGATAG CTATTACCGC ACATGGGGAG GACGCTATGT GCAGTTTGCG 
ATCGAATTAA AAGATGACTG GCTCAAGGGG CGCTCATTTC AGTACGGGGC GGAAGGTTAT 
ATCAAAATGA GCCCAGGCCA TTGGTATTTC CCAAGCCCAC TTTAA
 
Protein sequence
MVGQSDALTA SGQLPDIPAD SFFIPLDHGG VNFEIQVDTD ATEIILHELK EGNSESRSVQ 
LNTPIQVGEL LILIRPESEP WVPEQPEKLE TSAKKNEPRF KNGIVAALAG FFILGIGTVG 
TLWILNSPQR QAAELDSLLG QEKERFQVLP GRDKMLYVAA QNERDTLWAR QVLARGDYDK 
NARVINENEE NKRISTWLDT YYPQLAYYRL HFDEPRKPVF WLSRQRNTMS KKELEVLSQK 
LRALMPYADS VNITLMDDVT AAGQAEAGLK QQALPYSRRN HKGGVTFVIQ GALDDVEILR 
ARQFVDSYYR TWGGRYVQFA IELKDDWLKG RSFQYGAEGY IKMSPGHWYF PSPL