Gene SeSA_A3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3020 
Symbol 
ID6519416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2919304 
End bp2920191 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content37% 
IMG OID642748044 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002115821 
Protein GI194734906 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0395557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTGC CTTCAATGAA TAAATCAGTT GAGGCCATTA GCAATAATCA CCTTCAACAG 
CCGAACAAAT TTCCATTAAT AAATGGATTA GCTGACGTAA GAGACTATTA TGTCGCAAAC
TGCTTATTGT TTAAACTTAA TAAAGGCAGT TTGCGAATTG AAAACGAATT TGGGGAGTTC
ATCGAACAAT CTGCGCCGTG TTTATTTTTA TTGGAAAAAG ATCAAACAAT CACGCTTAGT
ATGAGCGAAA TAGAAGGGCA TATTGATTTT TCTTCACTGG AAGTTTCCTA TGACTTAATG
CAAAAATTCT ACAAAGTTTT TTACAGTACA AGAAACTATA ATGATCGAGA GCTATCATTA
AAAACGAAAC CAAAGTATTT TTTTCATGCG GACTTGTTGC CAGGGATGAG TGATACTTTT
GACTCTATTT TGCATGGTGT GGCATGTCCA CGGGTTTGTA GTAACGTGAG TATTGATGAT
CATGATTATT CATATTTCTC ATTGATGTAT CTTATATCAG CATTTGTACG TAAGCCCGGT
GGGTTTGATT TCCTTGAGCG AGCAATAAAA ATTACGACAA AAGAGAAAGT TTATAACATT
ATTATCAGCG ATCTCACCCG CAAATGGTCA CAGGCTGAGG TAGCAGGAAA GCTGTTTATG
AGCGTATCAA GTCTGAAGCG AAAACTGGCC GCTGAAGAGG TGAGTTTTAG CAAAATATAT
CTGGATGCTC GTATGAATCA GGCTATAAAA TTATTACGTA TGGGGGCTGG AAATATTTCA
CAAGTCGCGA CGATGTGTGG CTATGATACG CCTTCTTATT TTATCGCTAT TTTTAAACGG
CATTTTAAGA TTACACCGCT TAGCTTTATG CGTACGATGA ACCATTGA
 
Protein sequence
MVLPSMNKSV EAISNNHLQQ PNKFPLINGL ADVRDYYVAN CLLFKLNKGS LRIENEFGEF 
IEQSAPCLFL LEKDQTITLS MSEIEGHIDF SSLEVSYDLM QKFYKVFYST RNYNDRELSL
KTKPKYFFHA DLLPGMSDTF DSILHGVACP RVCSNVSIDD HDYSYFSLMY LISAFVRKPG
GFDFLERAIK ITTKEKVYNI IISDLTRKWS QAEVAGKLFM SVSSLKRKLA AEEVSFSKIY
LDARMNQAIK LLRMGAGNIS QVATMCGYDT PSYFIAIFKR HFKITPLSFM RTMNH