Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3010 |
Symbol | hypD |
ID | 6516654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 2908552 |
End bp | 2909673 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642748034 |
Product | hydrogenase expression/formation protein HypD |
Protein accession | YP_002115811 |
Protein GI | 194737254 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0409] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0121533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTTG TTGACGAGTA CCGTGCGCCG GAACAGGTAA TGCAGCTCAT TGAACACCTG CGTGAACGCG CCGCCCTTCT TCCTTACACT GCCGAACGTC CGTTGCGCAT TATGGAAGTC TGCGGGGGTC ATACCCACGC GATTTTTAAA TTTGGTCTCG ATCAGTTACT GCCCGAAAAC GTGGAGTTTA TTCACGGCCC CGGTTGTCCG GTCTGCGTGC TGCCGATGGG ACGCATCGAC AGTTGCGTGG AAATCGCCAG CCATCCGGAG GTGATTTTCT GCACCTTTGG CGATGCCATG CGCGTGCCGG GGAAACAGGG GTCTCTGTTG CAGGCTAAAG CGCGCGGCGC GGATGTGCGT ATTGTTTATT CTCCGATGGA CGCGCTGAAA CTGGCGCAGG ATAACCCGAC CCGCAAAGTG GTATTTTTCG GGCTGGGCTT TGAAACCACC ATGCCGACCA CCGCCATCAC GCTACAGCAG GCAAAACAGC GTGACGTGCG AAACTTCTAC TTTTTCTGCC AGCACATTAC GCTGATCCCG ACGCTGCGTA GCCTACTGGA GCAGCCGGAC AACGGCATTG ACGCCTTTCT TGCGCCAGGC CACGTCAGCA TGGTCATCGG CACCGAGGCG TACCAGTTTA TCGCCGCCGA TTTTAATCGC CCGCTGGTGG TGGCTGGATT CGAACCGCTT GATCTACTGC AAGGCGTGGT CATGCTGGTT GAGCAGAAAA TAGCGGCCCT AAGCCAGGTT GAAAACCAAT ACCGTCGCGT GGTGCCGGAT GCCGGAAACA TGCTGGCGCA GCAGGCCATC GCCGATGTAT TCTGCGTTAA TGGCGATAGC GAGTGGCGCG GTCTGGGCGT GATTGAATCC TCCGGCGTCC ACCTGACGCC AGAGTATCAG CGCTTTGACG CCGAAGCGCA TTTCCGCCCA GCGCCGCAGC AGGTCTATGA CGATCCGCGC GCCCGCTGCG GCGAAGTGCT GACCGGCAGA TGCAAGCCGC ATCAGTGCCC GCTATTTGGT AAAACATGTA ATCCAGAGAC CGCGTTTGGC GCGCTGATGG TCTCTTCCGA AGGCGCATGC GCCGCCTGGT ATCAGTATCG TCAGCAGGAG TGTGAAGTTT GA
|
Protein sequence | MRFVDEYRAP EQVMQLIEHL RERAALLPYT AERPLRIMEV CGGHTHAIFK FGLDQLLPEN VEFIHGPGCP VCVLPMGRID SCVEIASHPE VIFCTFGDAM RVPGKQGSLL QAKARGADVR IVYSPMDALK LAQDNPTRKV VFFGLGFETT MPTTAITLQQ AKQRDVRNFY FFCQHITLIP TLRSLLEQPD NGIDAFLAPG HVSMVIGTEA YQFIAADFNR PLVVAGFEPL DLLQGVVMLV EQKIAALSQV ENQYRRVVPD AGNMLAQQAI ADVFCVNGDS EWRGLGVIES SGVHLTPEYQ RFDAEAHFRP APQQVYDDPR ARCGEVLTGR CKPHQCPLFG KTCNPETAFG ALMVSSEGAC AAWYQYRQQE CEV
|
| |