| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2993 |
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| Symbol | hypF |
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| ID | 6517309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 2894931 |
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| End bp | 2897171 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642748017 |
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| Product | [NiFe] hydrogenase maturation protein HypF |
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| Protein accession | YP_002115794 |
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| Protein GI | 194735422 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.017038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAG ACACACCTTC CGGCGTACAG CTACGCATTC GGGGCAAAGT ACAGGGCGTC
GGTTTTCGTC CTTTTGTCTG GCAGCTGGCG CAGCAGTTGC GATTACACGG CGACGTGTGT
AATGACGGCG ACGGCGTCGT CGTTCGGCTG CTGGAAGAGC CGTCGCAATT TATTGCCGCG
CTCTATCAGG ATTGCCCGCC GCTGGCGCGC ATTGACAGCG TTGAACACGC GTCGTTGATA
TGGGAGCGCG CACCGACGGA TTTCGCTATT CGTCAGAGCG CAGGCGGTTC GATGAACACG
CAAATCGTGC CGGATGCGGC GACCTGCCCG GCATGTCTTG CCGAGATGAA TACCCCTGGC
GAGCGGCGCT ACCGTTATCC TTTCATCAAT TGCACCCACT GCGGACCACG CTTCACCATT
ATTCGCGCTA TGCCCTATGA CCGGCCATTT ACGGTGATGG CGGCGTTTCC CTTGTGTCCG
GAATGCGACA GCGAATACCG CGATCCGTAC GATCGCCGTT TTCATGCCCA GCCCGTTGCC
TGTCCGTCAT GCGGGCCGCA TCTTGAGTGG CGGAGCCAAC ATGAACGAGC GGAAAAAGAG
GCGGCTTTGC AGGCGGCGGT CGCCCAACTG AACGCTGGAG GCATTATTGC CGTTAAAGGG
CTGGGTGGTT TTCATCTGGC CTGCGATGCG CGCAACGATA ACGCAGTGGC GATGCTGCGG
GCGCGTAAAC ATCGCCCGGC GAAACCATTG GCGGTGATGT TGCCCACGGC GCAAACGCTG
CCGAGCGCGG CGCGTTCGCT GCTGACCACG CCAGCGGCCC CGATTGTACT GGTGGATAAG
CAGTATGTAC CTTCGCTGAG TGAGGGCATC GCGCCAGGGC TTACGGAGGT GGGCGTGATG
CTGCCAGCCA ACCCGTTGCA ACATCTCTTG TTGCAGGCGC TCAATTACCC GCTGGTGATG
ACATCCGGCA ACCTGAGCGG CAAACCGCCC GCCATCACCA ACGAACAGGC GCTGGACGAT
TTACACGATA TTGCCGATGG TTTTTTGTTG CACAATCGCG ACATTGTTCA GCGCATGGAC
GACTCTGTCG TGCGCGACAG CGGCGAAATG CTGCGTCGTT CGCGGGGATA CGTGCCGGAC
GCGATTGCGT TGCCGCCCGG ATTTCGCGAT GTGCCGCCGA TACTTTGTCT GGGCGCGGAT
CTGAAAAACA CGTTCTGTCT GGTACGCGGC GAACAGGCGG TTGTCAGCCA ACATTTGGGC
GATCTCAGCG ATGACGGTAT CCAGGCGCAG TGGCGCGAGG CATTGCGTTT GATCCAGTCA
ATCTACGATT TTACGCCAGA GCGTATCGTC TGTGATGCGC ATCCGGGCTA TGTTTCCAGT
CAGTGGGCCA GTGAGATGCG TCTGCCGACA GAGACGGTGT TACACCATCA TGCCCATGCG
GCGGCTTGCC TGGCCGAGCA TGGTTGGCCG CTGGACGGCG GAGAGGTGAT TGCCCTGACG
GTAGACGGTA TCGGCATGGG TGAGAATGGC GCGCTATGGG GCGGAGAATG TTTGCGGGTC
AATTATCGCG AATGCGAACA TTTAGGTGGT TTACCCGCCG TGGCGCTGCC GGGAGGCGAT
CTGGCTGCCA AACAGCCGTG GCGTAATCTG TTAGCGCAGT GCCTGCGCTT TGTGCCGGAC
TGGCAGGATT ACCCGGAGAC AGCGGGGCTG CAACAGCAAA ACTGGAGTAT CCTGGCGCGC
GCCATTGAGC GCGGCGTCAA TGCCCCGTTG GCCTCTTCCT GCGGGAGGTT GTTTGACGCG
GTGGCTGCCG CGCTTCGCTG CGCGCCAGCA TCGCTTAGCT ATGAGGGCGA GGCCGCCTGC
GCGCTGGAGG CGCTGGCCTC TCAATGCGCT AACGTTGAGC ATCCGGTAAC GATGCCGCTT
AACGGCGCTC AACTGGACGT CGCTGTTTTC TGGCGGCAAT GGTTGAACTG GCAGGCCACG
CCCGCGCAAC GCGCCTGGGC TTTTCATGAT GCGCTGGCGT GCGGGTTTGC CACGCTAATG
CGCCAGCAGG CTACGGCGCG GGGGATAACC ACTCTGGTCT TCAGCGGCGG GGTGATACAC
AACCGCTTAC TGCGCGCGCG TCTTGCCTTT TATCTTTCTG ATTTTAAATT GTTATTTCCG
CAGCGGTTAC CAGCGGGCGA CGGCGGGCTG TCGTTTGGAC AGGGCGTGAT TGCCGCAGCG
CGAGCGTTAA GGGAAGTGTA G
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| Protein sequence | MAIDTPSGVQ LRIRGKVQGV GFRPFVWQLA QQLRLHGDVC NDGDGVVVRL LEEPSQFIAA
LYQDCPPLAR IDSVEHASLI WERAPTDFAI RQSAGGSMNT QIVPDAATCP ACLAEMNTPG
ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMAAFPLCP ECDSEYRDPY DRRFHAQPVA
CPSCGPHLEW RSQHERAEKE AALQAAVAQL NAGGIIAVKG LGGFHLACDA RNDNAVAMLR
ARKHRPAKPL AVMLPTAQTL PSAARSLLTT PAAPIVLVDK QYVPSLSEGI APGLTEVGVM
LPANPLQHLL LQALNYPLVM TSGNLSGKPP AITNEQALDD LHDIADGFLL HNRDIVQRMD
DSVVRDSGEM LRRSRGYVPD AIALPPGFRD VPPILCLGAD LKNTFCLVRG EQAVVSQHLG
DLSDDGIQAQ WREALRLIQS IYDFTPERIV CDAHPGYVSS QWASEMRLPT ETVLHHHAHA
AACLAEHGWP LDGGEVIALT VDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD
LAAKQPWRNL LAQCLRFVPD WQDYPETAGL QQQNWSILAR AIERGVNAPL ASSCGRLFDA
VAAALRCAPA SLSYEGEAAC ALEALASQCA NVEHPVTMPL NGAQLDVAVF WRQWLNWQAT
PAQRAWAFHD ALACGFATLM RQQATARGIT TLVFSGGVIH NRLLRARLAF YLSDFKLLFP
QRLPAGDGGL SFGQGVIAAA RALREV
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