Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2986 |
Symbol | srlD |
ID | 6515359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 2887418 |
End bp | 2888197 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642748010 |
Product | sorbitol-6-phosphate dehydrogenase |
Protein accession | YP_002115787 |
Protein GI | 194734998 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.857802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0453568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAG TTGCCGTTGT CATTGGCGGA GGCCAGACCC TGGGGGCATT CCTTTGCCGT GGGCTTGCAG AAGAAGGATA CCGCGTGGCG GTCGTTGATA TTCAAAGCGA TAAAGCCGCG AATGTCGCCC AGGAAATTAA CGCCGATTTT GGCGAAGGTA TGGCGTACGG TTTTGGCGCT GACGCTACCA GCGAGCAGAG CGTGCTGGCG CTGTCCCGCG GCGTAGACGA GATTTTCGGG CGCGTCGATC TGCTGGTTTA CAGCGCGGGT ATCGCCAAAG CGGCGTTTAT CAGCGATTTC CAGCTGGGCG ATTTTGACCG CTCGCTACAG GTGAATCTGG TGGGCTATTT CCTCTGCGCC CGTGAGTTTT CCCGCCTGAT GATCCGCGAC GGCATTCAGG GGCGCATTAT TCAGATTAAC TCTAAATCCG GCAAAGTGGG CAGTAAACAC AACTCCGGCT ACAGCGCGGC GAAATTCGGC GGCGTGGGGT TAACCCAGTC TCTGGCGCTG GATCTGGCGG AATACGGCAT TACCGTACAC TCGTTGATGC TCGGCAACCT GTTGAAATCG CCAATGTTCC AGTCACTGCT GCCGCAATAC GCTACTAAAC TGGGCATTAA GCCCGACGAG GTGGAGCAGT ATTACATTGA TAAGGTACCG CTCAAACGCG GGTGTGATTA TCAGGATGTG CTGAACATGC TGCTATTTTA TGCCAGCCCG AAAGCGTCTT ATTGCACCGG GCAGTCGATC AACGTAACCG GCGGTCAAGT GATGTTCTGA
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Protein sequence | MNQVAVVIGG GQTLGAFLCR GLAEEGYRVA VVDIQSDKAA NVAQEINADF GEGMAYGFGA DATSEQSVLA LSRGVDEIFG RVDLLVYSAG IAKAAFISDF QLGDFDRSLQ VNLVGYFLCA REFSRLMIRD GIQGRIIQIN SKSGKVGSKH NSGYSAAKFG GVGLTQSLAL DLAEYGITVH SLMLGNLLKS PMFQSLLPQY ATKLGIKPDE VEQYYIDKVP LKRGCDYQDV LNMLLFYASP KASYCTGQSI NVTGGQVMF
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