Gene SeSA_A2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2980 
SymbolrecA 
ID6519556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2882048 
End bp2883109 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID642748004 
Productrecombinase A 
Protein accessionYP_002115781 
Protein GI194736708 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.200628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones5 
Fosmid unclonability p-value0.0000974758 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTATCG ACGAAAACAA ACAGAAAGCG TTGGCGGCAG CACTGGGCCA AATTGAAAAG 
CAATTTGGTA AAGGCTCCAT CATGCGTCTG GGTGAAGACC GTTCTATGGA TGTGGAAACT 
ATCTCCACCG GTTCGCTTTC ACTGGATATC GCACTCGGTG CGGGCGGTCT GCCGATGGGG 
CGTATCGTCG AAATTTACGG GCCGGAATCT TCCGGTAAAA CGACCCTGAC GCTACAGGTG 
ATTGCCGCTG CGCAGCGTGA AGGTAAAACC TGTGCGTTTA TCGATGCGGA ACACGCGCTT 
GACCCTGTTT ACGCACGCAA GCTGGGCGTC GATATCGATA ACCTGCTCTG TTCTCAGCCG 
GATACCGGCG AGCAGGCGCT GGAAATCTGT GACGCGCTGG CGCGTTCAGG CGCGGTGGAC 
GTCATTGTGG TCGACTCCGT AGCGGCGCTA ACGCCGAAAG CGGAAATCGA AGGCGAAATT 
GGCGACTCTC ACATGGGCCT CGCGGCGCGT ATGATGAGCC AGGCGATGCG TAAGCTGGCG 
GGGAACCTGA AACAGTCCAA CACGCTGTTG ATTTTCATCA ACCAGATCCG TATGAAGATT 
GGCGTGATGT TCGGCAACCC GGAAACCACC ACCGGCGGTA ACGCTCTGAA ATTCTACGCC 
TCTGTTCGTC TTGATATCCG TCGTATTGGC GCGGTGAAAG AGGGCGATAA TGTCGTGGGT 
AGCGAAACGC GTGTGAAAGT GGTGAAAAAC AAAATCGCCG CGCCGTTTAA GCAGGCCGAG 
TTCCAGATCC TCTACGGCGA AGGCATCAAC TTCTATGGCG AACTGGTTGA TCTGGGCGTG 
AAAGAGAAGC TGATCGAGAA AGCGGGCGCA TGGTACAGCT ACAACGGCGA GAAGATTGGC 
CAGGGCAAAG CGAACGCGAC TACCTGGCTG AAAGAGAACC CGGCGACAGC GAAAGAGATC 
GAGAAAAGGG TTCGTGAATT ACTGTTGAGT AATCAGAATG CCACGCCCGA TTTCGCCGTT 
GACGATAGCG AAGGCGTTGC AGAAACCAAC GAAGATTTTT AA
 
Protein sequence
MAIDENKQKA LAAALGQIEK QFGKGSIMRL GEDRSMDVET ISTGSLSLDI ALGAGGLPMG 
RIVEIYGPES SGKTTLTLQV IAAAQREGKT CAFIDAEHAL DPVYARKLGV DIDNLLCSQP 
DTGEQALEIC DALARSGAVD VIVVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA 
GNLKQSNTLL IFINQIRMKI GVMFGNPETT TGGNALKFYA SVRLDIRRIG AVKEGDNVVG 
SETRVKVVKN KIAAPFKQAE FQILYGEGIN FYGELVDLGV KEKLIEKAGA WYSYNGEKIG 
QGKANATTWL KENPATAKEI EKRVRELLLS NQNATPDFAV DDSEGVAETN EDF