Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2978 |
Symbol | alaS |
ID | 6515992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2878565 |
End bp | 2881195 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642748002 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_002115779 |
Protein GI | 194737652 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.471212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000181445 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCAAGA GCACCGCTGA GATCCGTCAG GCGTTTCTCG ACTTTTTCCA TAGTAAAGGG CATCAGGTAG TTGCCAGCAG TTCCCTGGTG CCTAACAATG ACCCCACTCT GTTGTTTACC AATGCCGGGA TGAACCAGTT CAAGGATGTT TTCCTTGGGC TCGATAAACG TAATTATTCC CGTGCAACCA CTTCCCAGCG TTGCGTACGC GCGGGGGGTA AACACAACGA TCTGGAAAAC GTCGGATACA CTGCACGTCA CCATACTTTC TTCGAAATGC TGGGCAACTT CAGCTTCGGC GATTACTTCA AACACGACGC CATTCAGTTC GCATGGGAAT TACTGACCGG TGAAAACTGG TTTGCTCTGC CAAAAGAGCG TTTATGGGTC ACCGTCTATG AAACCGACGA CGAAGCCTAT GAGATCTGGG AAAAAGAAGT CGGCATCCCG CGCGAGCGTA TCATCCGTAT CGGCGACAAT AAAGGCGCGC CATACGCATC GGATAACTTC TGGCAGATGG GCGACACCGG TCCCTGCGGT CCGTGCACCG AAATCTTCTA CGATCATGGC GACCACATCT GGGGCGGCCC TCCGGGAAGC CCGGAAGAAG ACGGCGATCG CTATATTGAG ATCTGGAACA TCGTCTTTAT GCAGTTCAAC CGTCAGGCTG ACGGGACGAT GGAACCATTG CCGAAACCGT CTGTAGATAC CGGTATGGGG CTGGAGCGTA TTGCCGCGGT ACTGCAACAC GTTAACTCTA ACTATGACAT CGACCTGTTC CGCACGTTGA TTGAAGCGGT AGCGAAAGTC ACCGGTGCCA CCGATCTGGG TAATAAATCG CTGCGCGTTA TCGCCGACCA CATCCGTTCC TGCGCATTCC TGGTTGCCGA TGGCGTGCTG CCGTCGAATG AAAACCGTGG CTATGTGCTG CGTCGCATTA TTCGTCGCGC GGTGCGTCAC GGCAACATGC TGGGCGCGAA AGAGACCTTC TTCTACAAGC TGGTTGGGCC GCTGATTGAG GTAATGGGCT CCGCAGGCGA AGAGTTGAAA CGTCAGCAGG CGCAGGTCGA GCAGGTTCTG AAAACGGAAG AAGAGCAGTT CGCCCGTACG CTGGAGCGCG GTCTGGCGCT GCTGGATGAA GAACTGGCGA AATTGCAGGG TGATACCCTG GACGGCGAAA CCGCTTTCCG TCTGTATGAT ACTTATGGTT TCCCGGTCGA TTTAACGGCG GACGTCTGCC GTGAGCGCAA TATCAAAGTC GACGAAGCCG GTTTTGAAGC AGCCATGGAA GAGCAACGCC GTCGCGCGCG CGAAGCTAGC GGTTTTGGCG CGGACTACAA CGCGATGATC CGCGTTGATA GCGCTTCTGA ATTTAAAGGT TATGACCATC TGGAACTGAA CGGCAAAGTG ACTGCGCTGT TTGTCGATGG TAAAGCGGTT GAAGCGATTA ACGCGGGACA GGAAGCGGTT GTCGTGCTGG ATCAGACCCC ATTCTATGCG GAATCAGGCG GTCAGGTTGG CGATAAAGGC GAGCTGAAAG GCGCTGGATT TACTTTCGCT GTGGACGACA CGCAAAAATA TGGTCAGGCG ATTGGTCATA TCGGCAAATT GTCTGCGGGC GCTCTGAAAG TGGGCGATGC GGTACAGGCT GACGTAGATG AAGCGCGCCG CGCACGTATC CGTCTGAACC ACTCCGCCAC GCACCTGATG CACGCGGCGT TGCGCCAGGT GCTTGGGACA CACGTTGCAC AGAAAGGTTC GCTGGTTAGC GATAAAGTGC TGCGCTTCGA CTTCTCGCAC AATGAAGCGA TGAAGCCGTC GGAGATTCGT CAGGTTGAAG ATTTGGTGAA TGCGCAAATT CGCCGCAACC TGCCGATTGA AACGAACATC ATGGATCTCG ACGCGGCGAA GGCGAAAGGC GCCATGGCGC TGTTTGGCGA GAAATATGAC GAACGTGTAC GCGTTCTGAG CATGGGCGAT TTCTCTACCG AACTGTGCGG CGGTACTCAC GCCAGTCGTA CCGGTGATAT CGGTCTATTC CGTATTATCT CTGAGTCCGG CACCGCAGCG GGCATTCGTC GTATTGAGGC GGTAACCGGT GAAGGCGCTA TGGCCACCGT TCATGCGCAA AGCGATCGCT TAAACGATAT TGCGCATCTG CTGAAGGGCG ACAGCCAGAA TCTGGGCGAC AAAGTGCGTG CCGTGCTGGA ACGTACACGT CAGCTGGAAA AAGAGTTGCA GCAGTTGAAG GACCAGGCCG CAGCGCAGGA GAGTGCAAAT CTTTCCAGTA AAGCGGTCGA TCTCAACGGC GTGAAGCTCC TGGTCAGCGA GCTTGCTAGT ATTGAGCCGA AAATGCTGCG AACCATGGTT GATGATCTGA AAAATCAACT GGGGTCTACC GTTATCGTAC TGGCAACGGT TGTTGAAGGT AAGGTTTCTC TGATTGCGGG CGTGTCGAAG GATGTGACCG ACCGGGTTAA AGCAGGGGAA TTGATTGGTA TGGTCGCTCA GCAGGTAGGC GGTAAGGGTG GCGGTCGTCC GGACATGGCG CAAGCCGGTG GTACGGATGC GGCAGCTCTG CCTGCAGCGT TAGCCAGTGT ACAAGGCTGG GTCAGCGCAA AATTGCAATA A
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Protein sequence | MSKSTAEIRQ AFLDFFHSKG HQVVASSSLV PNNDPTLLFT NAGMNQFKDV FLGLDKRNYS RATTSQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKHDAIQF AWELLTGENW FALPKERLWV TVYETDDEAY EIWEKEVGIP RERIIRIGDN KGAPYASDNF WQMGDTGPCG PCTEIFYDHG DHIWGGPPGS PEEDGDRYIE IWNIVFMQFN RQADGTMEPL PKPSVDTGMG LERIAAVLQH VNSNYDIDLF RTLIEAVAKV TGATDLGNKS LRVIADHIRS CAFLVADGVL PSNENRGYVL RRIIRRAVRH GNMLGAKETF FYKLVGPLIE VMGSAGEELK RQQAQVEQVL KTEEEQFART LERGLALLDE ELAKLQGDTL DGETAFRLYD TYGFPVDLTA DVCRERNIKV DEAGFEAAME EQRRRAREAS GFGADYNAMI RVDSASEFKG YDHLELNGKV TALFVDGKAV EAINAGQEAV VVLDQTPFYA ESGGQVGDKG ELKGAGFTFA VDDTQKYGQA IGHIGKLSAG ALKVGDAVQA DVDEARRARI RLNHSATHLM HAALRQVLGT HVAQKGSLVS DKVLRFDFSH NEAMKPSEIR QVEDLVNAQI RRNLPIETNI MDLDAAKAKG AMALFGEKYD ERVRVLSMGD FSTELCGGTH ASRTGDIGLF RIISESGTAA GIRRIEAVTG EGAMATVHAQ SDRLNDIAHL LKGDSQNLGD KVRAVLERTR QLEKELQQLK DQAAAQESAN LSSKAVDLNG VKLLVSELAS IEPKMLRTMV DDLKNQLGST VIVLATVVEG KVSLIAGVSK DVTDRVKAGE LIGMVAQQVG GKGGGRPDMA QAGGTDAAAL PAALASVQGW VSAKLQ
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