Gene SeSA_A2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2964 
Symbol 
ID6519532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2871881 
End bp2873251 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content47% 
IMG OID642747990 
Productputative glycoporin 
Protein accessionYP_002115772 
Protein GI194738374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.25903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00105838 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGCTA AATATTTGGC GCTGATGATC GGTGCTTGCT TTTCTCATAA CCTTTGGGCA 
GCGAATAATA TCACTATTGA GCAGCGTCTG GCTGAACTGG AGCAACGTGT TGTTAATGCT
GAAAAACGGG CATCCGATGC CGAGGCGCAA ATTCGCTCGC TGAAACAGCA GCAGGTCGCC
GCTACGCCGA CGGTGAATGT CCAGTCCGCC GAGCCCATAG CAGCAGGTAA AACGCCGCCG
AAGCTGACCT TATCCGGATT CAGCGATATT AAGTTCTATG GCGATGTCGA ATTTAATATG
GATGCGGCAA GCCGTTCCGG TAGCCTGACC TCGATGAGAA CGTCAGCAAA TAAAGATTGG
GCATCAGGAA CCAATGAACG CTGGGATATT AACGGACGCC TGTTACTGGG CTTTGATGGC
TACCAGCGGC TGGACAACGG TAATTTTGCC GGGTTCTCTG TACAGCCTCT GGCGGACCTG
ACCGGAAAAA TGAACCTTGA TGATGCCGTT TTCTTCTTTG GTCGTGAGAA TGACTGGAAA
ATTAAGGTTG GTCGTTTTGA AGCCTACGAT ATGTTCCCGC TGAATCAGGA TACGTTTATT
GAATATTCGG GGAATACAGC GAACGATCTT TACAGTGACG GTTACGGCTA TATCTATATG
ATGAAAGAAG GACGGGGACG TAGCGACAGT GGGGGTAACT TCCTGCTGAG TAAAACCATC
GACAACTGGT ATTTCGAAGT TAACACATTG CTGGAAAATG GCAGTACGTT ATATACCGAG
AAGCAGTACC ACGGAATGGA TTTAAGCAAC GATAAAAATG TGGCTTACGT CCGTCCGGTT
ATCGCCTGGC AAAACGGGCG TTTTTCAACG GCGATAGCGA TGGAAAGTAA CGTCGTTAAC
AACGCCTATG GCTATTATGA GAATGGGAAG TGGATCGATC AGTCAGATCG TACGGGCTAT
GGTTTTACCA TGACCTGGAA TGGTCAAAAA ACTGACCCGG AAGATGGCGC AGTGATTAAC
CTGAATACCG CCTATATGGA TGCGACCGAT GAGACAGATT TTACCGCTGG GGTGAATGCG
CTGTGGCATC GATTTGAACT GGGTTATATC TATGCGCATA ACAAAATCGA AGCCTTCAAT
GCTACTAATA TCGATGCCGT TTGTGAGGAC GATTGCTGGA TCACCGATCC CGGCAATTAT
GACATTCACA CTATTCATGC CTCATATTTA TTCCCCAACG TGATGGATAT GAAAAACTTT
AACATCTACC TCGGTGCCTA TGCTTCATGG GTAGAGGCCA ATCCGAATAA TGGCGATAAC
AGTGAAGATG CGCGTTACGG CGGGCGTCTG AGATTCAAAT ATTTCTTCTG A
 
Protein sequence
MKAKYLALMI GACFSHNLWA ANNITIEQRL AELEQRVVNA EKRASDAEAQ IRSLKQQQVA 
ATPTVNVQSA EPIAAGKTPP KLTLSGFSDI KFYGDVEFNM DAASRSGSLT SMRTSANKDW
ASGTNERWDI NGRLLLGFDG YQRLDNGNFA GFSVQPLADL TGKMNLDDAV FFFGRENDWK
IKVGRFEAYD MFPLNQDTFI EYSGNTANDL YSDGYGYIYM MKEGRGRSDS GGNFLLSKTI
DNWYFEVNTL LENGSTLYTE KQYHGMDLSN DKNVAYVRPV IAWQNGRFST AIAMESNVVN
NAYGYYENGK WIDQSDRTGY GFTMTWNGQK TDPEDGAVIN LNTAYMDATD ETDFTAGVNA
LWHRFELGYI YAHNKIEAFN ATNIDAVCED DCWITDPGNY DIHTIHASYL FPNVMDMKNF
NIYLGAYASW VEANPNNGDN SEDARYGGRL RFKYFF