Gene SeSA_A2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2921 
Symbol 
ID6517311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2833929 
End bp2835029 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content44% 
IMG OID642747950 
Producteffector protein pipB2 
Protein accessionYP_002115732 
Protein GI194734353 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.347087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0393811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATT TTATCATGTA CTGTGTTGCT CTCTCTGGGA GAAAATATAT GCAGCGTTCA 
CTCGGTAGTC TGGCCGGTAT GGCTACATCT GCTTTTGGCG CGGGGACTTC TGCTGCTATG 
CGGCAAGCCA CCTCTCCCAA AACTATTCTG GAACATATCA TTAACTTTTT TACCTGTGGT 
GGGGTGCGTC GGAAAAATGA AGCACAATAT CAGGAATTGA TAGACACTAT GGCTGATACA 
TTGAAAAGTT CAATGTCTGA CAGAGGTGCT CCGTTGCCAG AAAACATCAT ACTGGAGGAT 
ATGGATGGGT GTCGTGTCGA ATTTAATCTT CCTGGTGAGA ATAACGAAGC TGGACAAGTT 
ATTGTACGAG TCAGTAAAGG CGACCATTCT GAGACAAGAG AAATTCCGCT TGTCTCTTTT 
GAAAAAATAT GTCGAGCTTT ACTATTCAGA TGCGAATTTT CTCTTCCTCA GGATTCTGTA 
ATATTAACTG CCCAGGGAGG CATGAATCTT AAAGGCGCTG TCCTTACCGG AGCAAATCTG 
ACGGCAGAAA ATTTATGTGA CGCAGACTTA AGCGGCGCAG ATTTAGAGGG GGCAATACTG 
TTTATGGCGG ATTGTGACGG TGCAAATTTT AAGGGCGCAA ATCTATCGGG AGCATCATTA 
GGCGACAGTA ACTTAACGAA CGCCTGTCTG GAAGATAGTA TTATGTGTGG CGCTACCCTC 
GATCGCGCTA ATCTTACTGG CGCCAATTTA CAACACACAA GTCTGTTAGG CTGTAGCATG 
GTAGAATGTA ATTGTTCCGG TGCGAATATG GATCACGCTA ATGTTTCAGG CTCAACCCTT 
ATACGTGCCG ATATGAGCGG TGCGACATTA AAGGGTGCTA CTATAATGGC TGCTATTATG 
GAAGGCGCTG TCTTAACTCG GGCAAACCTG CAAAAGGCTA GTTTTACTGC TACGAACCTG 
GACGGGGCTG ATTTGTCTGA GGCTAATTTA AGAAATACCA GTTTTAAAGA TTGTACACTA 
ACCGATTTGC GTACCGAAGA CGCCACAATG TCTACAAGTA CACAAACACT TTTTAACGTA 
TTTTATAGTG AAAATATTTA G
 
Protein sequence
MINFIMYCVA LSGRKYMQRS LGSLAGMATS AFGAGTSAAM RQATSPKTIL EHIINFFTCG 
GVRRKNEAQY QELIDTMADT LKSSMSDRGA PLPENIILED MDGCRVEFNL PGENNEAGQV 
IVRVSKGDHS ETREIPLVSF EKICRALLFR CEFSLPQDSV ILTAQGGMNL KGAVLTGANL 
TAENLCDADL SGADLEGAIL FMADCDGANF KGANLSGASL GDSNLTNACL EDSIMCGATL 
DRANLTGANL QHTSLLGCSM VECNCSGANM DHANVSGSTL IRADMSGATL KGATIMAAIM 
EGAVLTRANL QKASFTATNL DGADLSEANL RNTSFKDCTL TDLRTEDATM STSTQTLFNV 
FYSENI