| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2915 |
|---|
| Symbol | |
|---|
| ID | 6519623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 2823496 |
|---|
| End bp | 2824611 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642747945 |
|---|
| Product | IroB |
|---|
| Protein accession | YP_002115727 |
|---|
| Protein GI | 194738018 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | [TIGR01426] glycosyltransferase, MGT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0618266 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TGTTTGTCGG TCCACCACTG TATGGACTGC TATACCCTGT GCTGTCCCTG
GCGCAAGCGT TTCGTGTTAA TGGCCATGAA GTACTGATTG CAAGCGGTGG AAAATTTGCA
CAGAAAGCAG CCGAAGCTGG GTTGGTGGTA TTTGACGCTG CGCCTGGTTT CGATTCGGAA
GCAGGTTATC GCCGTCAGGA GGCATTGCGA AAAGAAAATA ACATTGGAAC AAAAATGGGG
AACTTCTCAT TCTTCAGCGA AGAGATGACT GACCCACTGG TCGCGTTCGC CGGGCAGTGG
CGGCCAGATC TCATCGTCTA CCCTCCCCTT GGGGTCGTTG GACCACTGAT TGCCGCTAAG
TATGAAATTC CGGTAGTGAT GCAAACCGTC GGCTTCGGTC ATACGCCCTG GCACATCAAA
GGCGTGACGA AATCACTTTC TAACGCCTAC CGCCGCCATG GGGTCAGCGC GCCACCAAGA
GATCTGGCGT GGATAGACGT CACACCGCCC AGCATGAGCA TACTGCAAAA TGACGGAGAG
CCGGTTATCT CCATGCAATA CGTCCCGTAT AACGGCGGCG CCGTCTGGGA AGAATGGTGG
GAACGTACAC CTGATCGCAA GCGTCTTCTG GTCAGCCTCG GCACCGTCAA ACCGATGGTG
GATGGCCTGG ATCTGATTTC CTGGGTAATG GATTCTGCCG GCGAAGTAGA TGCCGAAATC
ATCCTGCATC TTCCGGCAAA CGCCCGCTCG GATTTACGTT CTCTGCCGCC GAATGTCCGT
CTGGTCGACT GGCTTCCGAT GGGCGTTTTC CTTAACGGCG CCGACGGTTT TATCCACCAT
GGCGGCGCAG GCAACACCCT GACGGCGCTG CATGCCGGCA TTCCGCAGAT AGTCTTTGGC
CAGGGTGCCG ACAGACCCGT CAATGCCCGC GCCGTGGTCG AGCGCGGATG CGGCATTATT
CCCGGTAAGA GCGGGCTTAC CAGCAGCATG ATCAATACCT TCCTCGGTAA TCGCGCGCTT
CGCGAGGCGT CGCAGGAGGT CGCGGCGGAA ATGGCGGCCC AGCCTTGCCC GACCGAGGTG
GCAAAAAAAC TGATCGCCAT GCTGCAACAC GGCTAA
|
|---|
| Protein sequence | MRILFVGPPL YGLLYPVLSL AQAFRVNGHE VLIASGGKFA QKAAEAGLVV FDAAPGFDSE
AGYRRQEALR KENNIGTKMG NFSFFSEEMT DPLVAFAGQW RPDLIVYPPL GVVGPLIAAK
YEIPVVMQTV GFGHTPWHIK GVTKSLSNAY RRHGVSAPPR DLAWIDVTPP SMSILQNDGE
PVISMQYVPY NGGAVWEEWW ERTPDRKRLL VSLGTVKPMV DGLDLISWVM DSAGEVDAEI
ILHLPANARS DLRSLPPNVR LVDWLPMGVF LNGADGFIHH GGAGNTLTAL HAGIPQIVFG
QGADRPVNAR AVVERGCGII PGKSGLTSSM INTFLGNRAL REASQEVAAE MAAQPCPTEV
AKKLIAMLQH G
|
|---|
| |