| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2888 |
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| Symbol | |
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| ID | 6519715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 2793125 |
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| End bp | 2795305 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642747920 |
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| Product | protein secretion ABC efflux system, permease and ATP-binding protein |
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| Protein accession | YP_002115702 |
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| Protein GI | 194735340 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.110147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG CCGCCCCCGA TGTAGAAGAG GTACTCAGTG AGCGCGCGCT AAGCCAATGG
GCGCAGGCCA TCAGCTATGT CGCCGGTCAT TATCGCGTTG CCTGTTCTCC CGGTTCAATT
CAGGCCAACG CCCCGTGGTT TAGGGGTAAA AGCAGAACGA CCGCCTTAAC GCAGCTCGCG
CGGCAGGCGG GTTTATCCTT TCATGCGCCG GACATAGACA AAACGGCATT TAGTCAGTGG
CGATTGCCGT TGGTTGTCGA GCTCCGGGAC AGGCAGTTAT TGGTCATCGA GCATGTTAAT
GGCGAAGATG CGGTAGACGT TTTTGTGATT GAAGAAGAGG GTCAGCGTAA CCGCCTGACG
CTCAGCGAGT TATTGCCGGA GATCCTCTAT GTTGCCGCGC TACGCCCGCT ATCGGCGCTC
AAGGATAGCC GCGTCGATCG CTATATCTCC CGCTTTAAAC CCGACTGGAT GCGCGAGCTG
GTTCTGCAGG ATATTCGCCC TTATTTACCG GTAATGGTCG CCGCCTTTCT GATTAACGTG
CTGTCGCTGG CCGGGATTGT GTTCTCTATG CAGGTTTACG ATCGAGTGAT CCCCGCTCAG
TCATATCCTA CCCTGTACGT GCTCTCCTTC GGCGTGCTGG TAGCGGTGCT GTTCGGTTTT
CTCCTGCGTG AAGCGCGTAC GCACATTATG GACGTGCTCG GTAAACGCGC CGATATGCGC
ATTTCCGATC GGGTATTCGG TCATGCGTTA AGGCTGCGCA ACAGCGCTAT CCCCCGTTCC
ACCGGCAGTT TTATCTCGCA GTTACGCGAA CTGGAGCAGA TCCGCGAGAT GATTACCTCT
TCAACGCTGG CGACCATTGT CGATCTGCCT TTCTTTTTCC TGTTTATGAT AGTCCTGGCG
ATTATTGCCC CACCGCTGGC ATGGATAGCG CCCGTGGCGG CTCTGCTGAT GATCCTGCCG
GGCGTCGCAC TGCAAAAAAG ACTGTCTGTC CTCGCCAACC AGGCCGCCCA CGAAGCGACG
CTACGCAATG CAGTCTTGGT CGAAAGCGTT CAGGGGCTGG AAGATATTAA ACTGATGCAG
GCGGAGAACC GCTTTCTTCA GCAGTGGAAT AGCTATATCC GTATTACCGG CGAGTCGGGT
CTACGCACCC GCAAACTCAC GCAAGGGCTT ATCAGTTGGG GGATGTCGGT ACAAAGTCTG
GTGTATGCCG CAGTGATTAT GTTCGGCGCA CCGATGGTCA TTGAAGGCAG TATGACTACC
GGCGCCGTGG TCGCCGCGTC GATGCTCGGC TCGCGGATGA TCGCGCCAAT GGCTAACCTG
TGCGGCGTGC TGGCGCGCTG GCAGCAGGTG AAAGCGGCGA AGATGGGTCT CGACAACATT
ATGCAACTGC CCACCGAAAC ACAGCATGAC GATAGCCTGA TACACCGCGA CATCCTCCAC
GGGCATTACC TCTTTGAAAA CGCTCAGTTT CGTTACCATA ACGACGATCA ACGCATACCG
TTGCGCCTCG TGCGTCTGGA GATCATGCCA GGCGAGCGGA TTGCGATACT GGGGCGTAAC
GGTGCGGGTA AATCCACACT TTTACAGGCG ATGGCGGGTG GCCTGGAGAT GATTCAGGGA
GATGCCCGGC TTGATAATCT CAGCTTGTCG CACATCGATA TGGCGGATTT ACGCCGCAAC
ATCGGCTTTC TTAGCCAGAA CGCGCGGCTT TTCTTCGGCA CCCTACGAGA GAACCTGACG
CTCGGCGCGC CGCACGCCAA CGATGAACAG ATTTTTGACG CGCTCGAAGT CAGCGGCGGC
GCCGTCTTCG TCAGGCGGCT GGCAAAAGGG TTGGATCATC CCATTATGGA GGGTGGTAAC
GGCCTGTCCG GCGGGCAGCG TCAGTCCCTG TTGCTGGCGA GAATGCTGCT GCGCTCCCCC
AATATTGTGC TACTTGACGA ACCCAGCGCC TCGCTGGACG AGCATACGGA GCGAGAGTTT
ATTCAGCGGT TACATCAGTG GCTTGGCAAC CGTACCCTGG TCGTCGCGAC GCACCGGGTA
CCAATACTGG AGCTGGTTGA GCGTGTCATT GTCCTGAAAG AAGGACAACT GGTGATGGAT
GCGCCAAAAG CGCAGGCGCT TAACGCGGAT CGAATGCAAA GTCACCGTCG GGAGTGGAAA
AATGAAAATC AATCAGCATG A
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| Protein sequence | MTRAAPDVEE VLSERALSQW AQAISYVAGH YRVACSPGSI QANAPWFRGK SRTTALTQLA
RQAGLSFHAP DIDKTAFSQW RLPLVVELRD RQLLVIEHVN GEDAVDVFVI EEEGQRNRLT
LSELLPEILY VAALRPLSAL KDSRVDRYIS RFKPDWMREL VLQDIRPYLP VMVAAFLINV
LSLAGIVFSM QVYDRVIPAQ SYPTLYVLSF GVLVAVLFGF LLREARTHIM DVLGKRADMR
ISDRVFGHAL RLRNSAIPRS TGSFISQLRE LEQIREMITS STLATIVDLP FFFLFMIVLA
IIAPPLAWIA PVAALLMILP GVALQKRLSV LANQAAHEAT LRNAVLVESV QGLEDIKLMQ
AENRFLQQWN SYIRITGESG LRTRKLTQGL ISWGMSVQSL VYAAVIMFGA PMVIEGSMTT
GAVVAASMLG SRMIAPMANL CGVLARWQQV KAAKMGLDNI MQLPTETQHD DSLIHRDILH
GHYLFENAQF RYHNDDQRIP LRLVRLEIMP GERIAILGRN GAGKSTLLQA MAGGLEMIQG
DARLDNLSLS HIDMADLRRN IGFLSQNARL FFGTLRENLT LGAPHANDEQ IFDALEVSGG
AVFVRRLAKG LDHPIMEGGN GLSGGQRQSL LLARMLLRSP NIVLLDEPSA SLDEHTEREF
IQRLHQWLGN RTLVVATHRV PILELVERVI VLKEGQLVMD APKAQALNAD RMQSHRREWK
NENQSA
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