Gene SeSA_A2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2873 
Symbolffh 
ID6517144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2769805 
End bp2771166 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content55% 
IMG OID642747906 
Productsignal recognition particle protein 
Protein accessionYP_002115688 
Protein GI194736625 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.110714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0858138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATA ATTTAACCGA TCGTTTGTCG CGCACGCTGC GCAATATCAG TGGCCGTGGG 
CGCCTTACTG AAGACAACGT TAAAGAGACG CTGCGCGAAG TGCGCATGGC GCTGCTGGAG
GCTGACGTTG CGCTGCCGGT AGTGCGTGAG TTCATCAATC GCGTAAAAGA GAAAGCGGTT
GGTCATGAAG TTAACAAGAG CCTGACCCCT GGGCAGGAGT TCGTCAAGAT TGTCCGTAGC
GAACTGGTTG CGGCGATGGG CGAAGAGAAC CAGACGCTGA ATTTAGCTGC GCAGCCGCCA
GCCGTAGTAT TGATGGCGGG TCTGCAGGGG GCGGGTAAAA CCACCAGCGT CGGTAAGCTG
GGTAAATTCT TGCGCGAGAA GCACAAGAAG AAAGTGCTGG TCGTCTCTGC CGACGTCTAT
CGCCCGGCGG CGATCAAACA GCTCGAAACG CTGGCTGAAC AGGTTGGCGT GGATTTCTTC
CCGTCTGATG TCGGCCAGAA ACCGGTTGAT ATCGTCAACG CCGCGCTGAA AGAAGCGAAG
CTCAAATTCT ACGACGTGCT GCTGGTGGAT ACCGCCGGTC GTCTGCACGT TGACGAAGCG
ATGATGGACG AAATCAAACA GGTCCACGCT TCTATCAAGC CAGTAGAAAC GCTGTTTGTC
GTCGATGCGA TGACCGGTCA GGATGCCGCG AATACCGCAA AAGCCTTTAA CGAAGCGCTG
CCGTTAACCG GCGTGGTGCT GACCAAGGTC GATGGTGATG CGCGTGGCGG TGCGGCGCTC
TCTATTCGTC ATATCACCGG CAAGCCGATT AAATTCCTCG GTGTCGGCGA GAAAACCGAC
GCGCTGGAGC CGTTCCACCC GGATCGTATC GCCTCACGTA TTCTCGGCAT GGGCGACGTA
CTGTCTCTTA TCGAAGATAT CGAAAGCAAA GTTGACCGCG CACAGGCTGA AAAGCTGGCG
ACCAAACTGA AGAAAGGCGA CGGTTTCGAC CTGAACGACT TCCTGGAACA GCTCAAACAG
ATGAAAAACA TGGGCGGTAT GGCCAGTCTG ATGGGCAAAT TACCGGGCAT GGGGCAGATT
CCGGACAACG TTAAATCGCA AATGGATGAC AAAGTGCTGG TGCGTATGGA GGCGATCATC
AATTCGATGA CGCTGAAAGA GCGCGCGAAG CCGGAAATCA TCAAAGGTTC CCGTAAACGC
CGTATCGCAC AAGGCTGTGG GATGCAGGTG CAGGACGTTA ACCGCCTTCT GAAACAGTTC
GACGACATGC AGCGCATGAT GAAGAAAATG AAGAAGGGCG GGATGGCGAA GATGATGCGG
AGTATGAAGG GGATGATGCC GCCAGGCTTC CCGGGTAGAT AA
 
Protein sequence
MFDNLTDRLS RTLRNISGRG RLTEDNVKET LREVRMALLE ADVALPVVRE FINRVKEKAV 
GHEVNKSLTP GQEFVKIVRS ELVAAMGEEN QTLNLAAQPP AVVLMAGLQG AGKTTSVGKL
GKFLREKHKK KVLVVSADVY RPAAIKQLET LAEQVGVDFF PSDVGQKPVD IVNAALKEAK
LKFYDVLLVD TAGRLHVDEA MMDEIKQVHA SIKPVETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVVLTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV
LSLIEDIESK VDRAQAEKLA TKLKKGDGFD LNDFLEQLKQ MKNMGGMASL MGKLPGMGQI
PDNVKSQMDD KVLVRMEAII NSMTLKERAK PEIIKGSRKR RIAQGCGMQV QDVNRLLKQF
DDMQRMMKKM KKGGMAKMMR SMKGMMPPGF PGR