Gene SeSA_A2818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2818 
Symbol 
ID6515775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2721832 
End bp2722758 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content43% 
IMG OID642747853 
Productputative transcriptional regulator 
Protein accessionYP_002115638 
Protein GI194735984 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.238125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.998647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA AACAACTACA TTCCTTCCTG ATATTGTGTG ATGAATTACA TTATGGTCGG 
GCAGCCAGTC GCCTGTTTAT CACTCAGCCA TCATTAAGTC AGCAAATCAA ACAACTTGAG 
TCATCACTTA AAACAATATT ATTTAAGCGA AAAGGTAGAG GAATTAAATT AACAAAAGCA 
GGTATTATTT TGCAACGACA CGCTAACAAA ATAATGCTGG ATTTAAAAAA TGCCGAAAAT 
GAACTTCTTC CCTATCAGGA TCAACAGCGC GATACTATTT CAATCGGGGT GTCAGGCAGC 
TACCTGGTCC TGCCCGCTTT TCGCAGCTTT ATGGCGCACC ATCCGGAAAT ATCTTTAAAT 
GTTAAAGAGT TCTCAACTGA GCAAACCATT AAAAGGCTGA CGGATAGCGC CGTTGATATT 
GGCATTGTTT ATCGAACAGC GCTCCCTGCC CAGCTAAGTT CGACCATGCT GTTTGAAGAT 
GAAATTATCG CTGCAATCCC ACTTTCTCAT CCTCTGGCGA CACGCGAACG TCTGCAGCTA 
AAAGATTTAA ACGACCAGCC CATTATCGTG CTTAATGACT CTCTGCTATT AAGAGGGATC 
ATCACCACTG AATTTAATAA CCGCAAAGTC GTTCCTAACG TCATCTGCGA ACTGGATAAC 
CACTACTCAT GCCTTGAGTA TGCCGAAGCG CAGATTGGCA TCGCATTTAT TACCCGCTCG 
CTAACCCATT TATCGACACC CAAAAATGTT CGCCTGGTTT CACTGGGCAT CCCCGCATTC 
TTTATTCCTG TCATGCTGGT GCACAGTAAT GACCTTTCAC TGGATAACGC AACCATCTGC 
CTGCTCAAGC AGATCAAAAA TTTTTACACT GTAGATAACA AATCAGCGCC AGAAAAGAGC 
TGGCCCGAGC AGAAAATAGG CGTATAA
 
Protein sequence
MNIKQLHSFL ILCDELHYGR AASRLFITQP SLSQQIKQLE SSLKTILFKR KGRGIKLTKA 
GIILQRHANK IMLDLKNAEN ELLPYQDQQR DTISIGVSGS YLVLPAFRSF MAHHPEISLN 
VKEFSTEQTI KRLTDSAVDI GIVYRTALPA QLSSTMLFED EIIAAIPLSH PLATRERLQL 
KDLNDQPIIV LNDSLLLRGI ITTEFNNRKV VPNVICELDN HYSCLEYAEA QIGIAFITRS 
LTHLSTPKNV RLVSLGIPAF FIPVMLVHSN DLSLDNATIC LLKQIKNFYT VDNKSAPEKS 
WPEQKIGV