Gene SeSA_A2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2796 
SymbolglyA 
ID6515716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2694787 
End bp2696040 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content57% 
IMG OID642747833 
Productserine hydroxymethyltransferase 
Protein accessionYP_002115618 
Protein GI194735000 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGC GTGAAATGAA CATTGCCGAT TATGATGCCG AATTGTGGCA GGCTATGGAG 
CAGGAAAAAG TACGTCAGGA AGAGCACATC GAACTGATCG CCTCCGAAAA CTACACCAGC 
CCGCGCGTGA TGCAGGCGCA GGGGTCTCAG CTGACCAACA AATACGCTGA AGGTTATCCG 
GGCAAGCGCT ACTACGGCGG TTGCGAATAC GTTGATATTG TAGAGCAACT GGCTATCGAC 
CGCGCGAAAG AACTGTTCGG CGCCGACTAC GCTAACGTGC AGCCGCACTC CGGTTCTCAG 
GCTAACTTCG CTGTTTACAC CGCGCTGCTG CAGCCGGGCG ATACCGTTCT GGGTATGAAC 
CTGGCGCAGG GCGGCCACCT GACTCACGGC TCCCCGGTTA ACTTCTCCGG TAAACTGTAC 
AACATCGTAC CTTACGGTAT CGATGAGTCC GGTAAAATTG ACTATGACGA GATGGCGAAG 
CTGGCCAAAG AGCACAAGCC GAAGATGATT ATCGGTGGCT TCTCTGCCTA CTCCGGCGTG 
GTTGACTGGG CAAAAATGCG TGAAATCGCT GATAGCATTG GCGCATACCT GTTTGTCGAC 
ATGGCGCACG TAGCGGGCCT GATTGCCGCA GGCGTTTACC CGAACCCGGT TCCGCACGCT 
CACGTTGTCA CCACCACCAC CCACAAAACC CTGGCGGGTC CGCGCGGCGG CCTGATCCTG 
GCGAAAGGCG GCGACGAAGA GCTGTACAAA AAACTGAACT CTGCCGTCTT CCCAAGCGCG 
CAGGGCGGCC CGCTGATGCA CGTGATCGCC GGTAAAGCGG TAGCGCTGAA AGAAGCGATG 
GAGCCGGAGT TCAAAGTCTA CCAGCAGCAG GTGGCGAAAA ACGCCAAAGC GATGGTGGAA 
GTGTTCCTGA ACCGCGGCTA CAAAGTGGTG TCTGGCGGCA CTGAGAACCA CCTGTTCCTG 
CTGGACCTGG TGGATAAAAA CCTGACCGGT AAAGAAGCTG ACGCCGCGCT GGGCCGTGCT 
AACATCACCG TGAACAAAAA CAGCGTGCCG AACGATCCGA AGAGCCCGTT CGTGACCTCC 
GGTATCCGTA TCGGTTCCCC GGCGGTTACT CGTCGCGGCT TCAAAGAAGC GGAAGTGAAA 
GAGCTGGCTG GCTGGATGTG CGACGTGCTG GACAACATCA ATGATGAAGC CACCATTGAA 
CGCGTGAAAG CGAAAGTACT GGATATCTGC GCCCGCTTCC CGGTTTACGC GTAA
 
Protein sequence
MLKREMNIAD YDAELWQAME QEKVRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP 
GKRYYGGCEY VDIVEQLAID RAKELFGADY ANVQPHSGSQ ANFAVYTALL QPGDTVLGMN 
LAQGGHLTHG SPVNFSGKLY NIVPYGIDES GKIDYDEMAK LAKEHKPKMI IGGFSAYSGV 
VDWAKMREIA DSIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTTTTHKT LAGPRGGLIL 
AKGGDEELYK KLNSAVFPSA QGGPLMHVIA GKAVALKEAM EPEFKVYQQQ VAKNAKAMVE 
VFLNRGYKVV SGGTENHLFL LDLVDKNLTG KEADAALGRA NITVNKNSVP NDPKSPFVTS 
GIRIGSPAVT RRGFKEAEVK ELAGWMCDVL DNINDEATIE RVKAKVLDIC ARFPVYA