Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2785 |
Symbol | iscR |
ID | 6517206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2684037 |
End bp | 2684531 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642747822 |
Product | DNA-binding transcriptional regulator IscR |
Protein accession | YP_002115607 |
Protein GI | 194737710 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000620626 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACTGA CATCTAAAGG GCGTTATGCC GTGACCGCAA TGTTAGACGT TGCGCTCAAC TCCGAAGCGG GCCCGGTACC GTTGGCTGAT ATTTCTGAAC GTCAGGGGAT TTCCCTTTCT TATCTGGAAC AGCTATTTTC CCGTTTACGT AAAAACGGTC TGGTTTCCAG CGTACGCGGG CCGGGCGGCG GTTATCTGCT GGGTAAAGAT GCTGGCAGTA TCGCGGTCGG CGAAGTGATC AGCGCGGTTG ATGAATCCGT TGACGCGACC CGTTGCCAGG GCAAAGGCGG CTGCCAGGGC GGCGATAAAT GCCTGACCCA TGCGCTGTGG CGTGATTTAA GCGATCGCCT GACCGGTTTT CTCAACAATA TTACCTTAGG CGAGCTGGTG AATAACCAGG AAGTTCTGGA TGTGTCTGGT CGCCAGCACA CGCATGACGC GCCGCGCGCC AGCGGTCGTG CGCAGGACGC TATCGACGTT AAATTACGCG CTTAA
|
Protein sequence | MRLTSKGRYA VTAMLDVALN SEAGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVSSVRG PGGGYLLGKD AGSIAVGEVI SAVDESVDAT RCQGKGGCQG GDKCLTHALW RDLSDRLTGF LNNITLGELV NNQEVLDVSG RQHTHDAPRA SGRAQDAIDV KLRA
|
| |