Gene SeSA_A2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2762 
SymbolispG 
ID6519948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2658469 
End bp2659587 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content55% 
IMG OID642747800 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_002115585 
Protein GI194735499 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.773103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAACC AGGCTCCGAT TCAACGTAGA AAATCGACAC GTATTTACGT TGGGAATGTG 
CCGATTGGCG ATGGCGCCCC CATCACCGTT CAGTCGATGA CTAACACGCG TACCACTGAC 
GTGGAAGCGA CGGTTAATCA GATCAAAGCG CTGGAACGCG TTGGCGCAGA TATTGTTCGT 
GTTTCTGTAC CGACCATGGA CGCCGCCGAA GCGTTCAAGC TTATCAAACA GCAGGTTAAC 
GTCCCGCTGG TTGCCGATAT TCACTTCGAC TACCGCATTG CGCTGAAAGT AGCGGAATAC 
GGCGTTGACT GCTTGCGTAT CAACCCCGGC AATATCGGTA ACGAAGAGCG CATTCGTATG 
GTGGTGGACT GCGCGCGCGA CAAAAACATC CCTATTCGTA TCGGCGTAAA TGCCGGATCG 
CTGGAAAAAG ATCTGCAGGA AAAATACGGT GAGCCGACGC CGCAGGCGCT GCTGGAATCA 
GCCATGCGCC ATGTCGATCA TCTCGATCGT CTCAACTTTG ATCAGTTCAA AGTGAGCGTA 
AAAGCGTCCG ATGTATTCCT TGCCGTTGAG TCTTATCGTT TGTTAGCCAA GCAGATCGAT 
CAGCCGCTGC ATCTGGGGAT CACCGAAGCG GGCGGCGCGC GTAGCGGGGC AGTCAAGTCG 
GCGATCGGTT TAGGTCTGCT GTTATCGGAA GGCATCGGCG ACACGCTGCG CGTATCGTTG 
GCGGCCGACC CGGTGGAAGA GATCAAAGTC GGTTTCGATA TTTTGAAGTC GCTGCGCATT 
CGCGCGCGCG GCATCAATTT CATCGCCTGC CCGACCTGTT CTCGCCAGGA GTTCGACGTT 
ATCGGCACGG TGAACGCGCT GGAGCAGCGT CTGGAAGATA TCATCACCCC GATGGACGTC 
TCGATCATCG GTTGCGTAGT GAACGGACCG GGCGAAGCGC TGGTATCGAC GCTGGGCGTG 
ACGGGCGGCA ATAAGAAAAG CGGCCTGTAT GAAGACGGCG TGCGTAAGGA CAGACTCGAT 
AACGACGATA TGATCGCGCA GCTTGAATCC CGTATTCGCG CGAAAGCAAG TCAACTTGAT 
GAAGCGCGTC GGATTGACGT GCTGCAGGTT GAAAAATAA
 
Protein sequence
MHNQAPIQRR KSTRIYVGNV PIGDGAPITV QSMTNTRTTD VEATVNQIKA LERVGADIVR 
VSVPTMDAAE AFKLIKQQVN VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEERIRM 
VVDCARDKNI PIRIGVNAGS LEKDLQEKYG EPTPQALLES AMRHVDHLDR LNFDQFKVSV 
KASDVFLAVE SYRLLAKQID QPLHLGITEA GGARSGAVKS AIGLGLLLSE GIGDTLRVSL 
AADPVEEIKV GFDILKSLRI RARGINFIAC PTCSRQEFDV IGTVNALEQR LEDIITPMDV 
SIIGCVVNGP GEALVSTLGV TGGNKKSGLY EDGVRKDRLD NDDMIAQLES RIRAKASQLD 
EARRIDVLQV EK