Gene SeSA_A2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2730 
Symbol 
ID6515410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2609781 
End bp2610869 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content55% 
IMG OID642747774 
Productpermease PerM 
Protein accessionYP_002115559 
Protein GI194734852 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.659097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.956035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTCTG GGAAGGGTTT TATGCTCGAA ATGTTAATGC AATGGTATCG CCGTCGCTTC 
AGCGACCCGG AGGCGATTGC CTTGCTGGTC ATTCTGGTGG CTGGTTTTAG CATCCTCTTT 
TTCTTTAGCG GCCTGTTAGC GCCGCTGCTG GTCGCAATCG TACTGGCCTA CCTGCTGGAG 
TGGCCGACGG CGCGCCTGCA GGCGATTGGC TGTTCCCGGC GCTGGGCAGC CTCCATTGTC 
CTTATCCTCT TTGTCGGCAT TCTGTTATTA ATGGCGTTTG TGGTGATGCC GATTGCCTGG 
CAGCAGGGTA TTTACCTGAT TCGTGATATG CCCGGTATGC TGAATAAACT GTCCGATTTT 
GCCGCGACCT TGCCGCGACG CTATCCGGCG CTGATGGATG CGGGCATTAT TGATGCGATG 
GCGGAAAACA TGCGTACCCG GATGCTTAAC ATGGGCGATT CGGTGGTGAA GTATTCGCTG 
GCTTCGTTAG TCGGGCTACT GACGCTGGCG GTATATCTGG TGCTGGTGCC GCTGATGGTC 
TTTTTCCTGG TAAAAGATAA AGAGCAGATG CTGAATGCCG TGCGCCGCGT GCTGCCGCGT 
AATCGCGGGC TGGCGGGGCA GGTGTGGAAT GAGATGAATC AGCAGATCAC CAACTATATC 
CGCGGAAAAG TGCTGGAGAT GGTGGTGGTG GGCGTAGCGA CCTGGCTGGG CTTTTTGCTG 
TTTGGCCTCA ATTATTCGCT ACTGCTGGCG GTACTGGTGG GCTTTTCGGT CCTGATCCCC 
TATATCGGCG CCTTTGTGGT GACAATTCCG GTGGTGGGCG TCGCGCTGTT TCAGTTTGGC 
CTGGGGACGG AATTCTGGAG CTGTTTTGCC GTTTATCTGA TTATTCAGGC GCTGGATGGC 
AATTTGCTGG TACCGGTACT TTTCTCCGAA GCGGTGAATT TGCATCCGCT GGTGATTATT 
CTGTCAGTGG TGATTTTCGG CGGTCTGTGG GGTTTTTGGG GAGTGTTTTT CGCCATTCCA 
TTGGCGACGC TGATTAAAGC CGTTGTCCAT GCCTGGCCGG ATGGTCAGGT GACAGATGCC 
TCATCCTGA
 
Protein sequence
MSSGKGFMLE MLMQWYRRRF SDPEAIALLV ILVAGFSILF FFSGLLAPLL VAIVLAYLLE 
WPTARLQAIG CSRRWAASIV LILFVGILLL MAFVVMPIAW QQGIYLIRDM PGMLNKLSDF 
AATLPRRYPA LMDAGIIDAM AENMRTRMLN MGDSVVKYSL ASLVGLLTLA VYLVLVPLMV 
FFLVKDKEQM LNAVRRVLPR NRGLAGQVWN EMNQQITNYI RGKVLEMVVV GVATWLGFLL 
FGLNYSLLLA VLVGFSVLIP YIGAFVVTIP VVGVALFQFG LGTEFWSCFA VYLIIQALDG 
NLLVPVLFSE AVNLHPLVII LSVVIFGGLW GFWGVFFAIP LATLIKAVVH AWPDGQVTDA 
SS