Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2643 |
Symbol | nupC |
ID | 6516474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 2527984 |
End bp | 2529186 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642747689 |
Product | nucleoside transporter NupC |
Protein accession | YP_002115480 |
Protein GI | 194735794 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCG TCCTTCATTT TGTCCTGGCG CTTGCCGTTG TTGCGGTACT CGCACTGCTG GTTAGCAGTG ACCGTAAAAA AATTCGCATT CGTTATGTCA TTCAGTTACT TGTTATCGAA GTGCTACTGG CCTGGTTCTT CCTGAACTCT GATGTTGGCC TTGGCTTCGT AAAAGGTTTC TCCGAGATGT TTGAAAAACT GCTCGGATTT GCCAACGAAG GGACAAACTT CGTCTTCGGC AGTATGAACG ATCAAGGTTT GGCGTTCTTC TTCCTGAAAG TATTGTGCCC GATTGTCTTT ATTTCCGCGT TGATCGGTAT TCTCCAGCAT ATCCGTGTTC TGCCAGTGGT CATCCGCGCT ATTGGTTTCC TGCTGTCCAA AGTAAACGGT ATGGGCAAAC TGGAATCTTT TAACGCCGTC AGCTCGCTGA TCCTCGGCCA GTCTGAGAAC TTTATCGCTT ATAAAGATAT CCTCGGCAAA ATGTCCCGTA ACCGCATGTA CACCATGGCT GCAACGGCGA TGTCGACCGT TTCCATGTCT ATTGTGGGCG CGTATATGAC CATGCTGGAC CCTAAATATG TGGTCGCAGC GCTGGTTCTG AACATGTTCA GCACCTTTAT CGTACTGTCG CTGATCAACC CCTATACCGT TGATGCCAGC GAAGAAAATA TTCAGATGTC GAACCTGCAT GAAGGCCAAA GTTTCTTCGA AATGCTGGGC GAGTACATTC TGGCAGGTTT TAAAGTGGCG ATTATCGTCG CGGCGATGCT GATCGGCTTC ATCGCGCTGA TCGCGGCCCT GAACGCCCTG TTCGCCACCG TGACCGGCTG GTTTGGTTAC AGCATCTCCT TCCAGGGCAT CCTGGGCTAC ATCTTCTACC CGGTTGCATG GGTAATGGGT GTGCCGTCCA GCGAAGCGCT GCAGGTGGGC AGTATCATGG CGACCAAACT GGTTTCCAAC GAATTCGTGG CGATGATGGA TCTGCAGAAA ATTGCCGCCA CTCTCTCTCC GCGTGCAGAA GGTATCCTGT CCGTCTTCCT GGTATCCTTC GCGAACTTCT CTTCCATCGG TATTATTGCG GGCGCGATTA AAGGCCTGAA CGAAGAGCAA GGCAACGTGG TTTCCCGTTT TGGTCTGAAA CTGGTTTACG GTTCTACGCT GGTGAGCGTA CTGTCCGCCT CTATCGCGGC GCTGGTACTG TAA
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Protein sequence | MDRVLHFVLA LAVVAVLALL VSSDRKKIRI RYVIQLLVIE VLLAWFFLNS DVGLGFVKGF SEMFEKLLGF ANEGTNFVFG SMNDQGLAFF FLKVLCPIVF ISALIGILQH IRVLPVVIRA IGFLLSKVNG MGKLESFNAV SSLILGQSEN FIAYKDILGK MSRNRMYTMA ATAMSTVSMS IVGAYMTMLD PKYVVAALVL NMFSTFIVLS LINPYTVDAS EENIQMSNLH EGQSFFEMLG EYILAGFKVA IIVAAMLIGF IALIAALNAL FATVTGWFGY SISFQGILGY IFYPVAWVMG VPSSEALQVG SIMATKLVSN EFVAMMDLQK IAATLSPRAE GILSVFLVSF ANFSSIGIIA GAIKGLNEEQ GNVVSRFGLK LVYGSTLVSV LSASIAALVL
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