Gene SeSA_A2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2621 
Symbol 
ID6516305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2506470 
End bp2507225 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content54% 
IMG OID642747669 
Productlipoprotein, VacJ family 
Protein accessionYP_002115461 
Protein GI194737372 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.447032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTC GCCTGTCGGC GCTGGCGCTG GGAACCACAC TGCTGGTCGG GTGTGCGAGT 
TCCGGTACAG AACAGCAGGG GCGTTCAGAC CCATTTGAAG GGTTTAACCG CACCATGTAC 
AACTTCAACT TTAATGTGCT GGACCCGTAT GTTGTTCGGC CGGTCGCGGT CGCCTGGCGT 
GATTATGTTC CACAGCCTGC GCGTAACGGT TTAAGTAATT TCACCGGTAA CCTCGAAGAA 
CCGGCGATCA TGGTGAACTA TTTCCTGCAG GGCGATCCTT ATCAGGGTAT GGTGCATTTC 
ACCCGTTTCT TCCTGAATAC CTTATTAGGG ATGGGCGGCT TTATTGACGT CGCGGGAATG 
GCGAATCCTA AGCTGCAGCG CGTTGAACCG CATCGCTTTG GCAGTACGCT GGGCCATTAT 
GGCGTGGGGT ATGGGCCTTA TATGCAACTT CCGTTCTACG GCAGCTTCAC GCTGCGTGAA 
GATGGCGGGG ATATGGCGGA TACCTTGTAT CCGGTGCTCT CGTGGTTGAC CTGGCCAATG 
TCCATAGGAA AATGGACTAT CGAAGGGATA GAAACCCGCG CGCAGTTGCT GGACTCCGAT 
GGTTTGCTGC GCCAGTCTTC CGATCCTTAT ATTATGGTGC GCGAGGCGTA CTTCCAGCGT 
CATGACTTTA TCGCCAATGG CGGAAAACTC AAGCCGCAGG AAAACCCGAA CGCGCAGGCG 
ATTCAGGACG AACTCAAAGA GATCGACTCG GAATAA
 
Protein sequence
MKLRLSALAL GTTLLVGCAS SGTEQQGRSD PFEGFNRTMY NFNFNVLDPY VVRPVAVAWR 
DYVPQPARNG LSNFTGNLEE PAIMVNYFLQ GDPYQGMVHF TRFFLNTLLG MGGFIDVAGM 
ANPKLQRVEP HRFGSTLGHY GVGYGPYMQL PFYGSFTLRE DGGDMADTLY PVLSWLTWPM 
SIGKWTIEGI ETRAQLLDSD GLLRQSSDPY IMVREAYFQR HDFIANGGKL KPQENPNAQA 
IQDELKEIDS E