Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2584 |
Symbol | |
ID | 6516038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2468608 |
End bp | 2469390 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642747633 |
Product | lysine-arginine-ornithine-binding periplasmic protein |
Protein accession | YP_002115425 |
Protein GI | 194735350 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.176074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA CCGTTCTCGC TTTGTCTTTG CTGATAGGTC TGGGCGCGAC GGCGGCCAGT TACGCCGCGC TCCCGCAAAC GGTTCGTATT GGAACAGATA CCACCTACGC GCCTTTCTCA TCAAAAGATG CCAAAGGCGA GTTTATTGGC TTTGATATCG ATCTCGGTAA TGAAATGTGT AAGCGTATGC AGGTGAAATG TACCTGGGTC GCCAGCGACT TTGATGCGCT TATTCCCTCA CTAAAAGCGA AAAAAATTGA TGCCATTATT TCATCGCTCT CTATCACCGA TAAACGCCAG CAAGAAATTG CGTTTTCCGA CAAACTTTAC GCGGCGGATT CACGTCTGAT TGCGGCAAAA GGGTCTCCCA TTCAGCCGAC GCTGGAATCG CTGAAAGGCA AGCATGTCGG CGTGCTGCAA GGGTCCACGC AAGAGGCTTA CGCCAATGAT AACTGGCGCA CTAAAGGTGT GGATGTGGTG GCTTATGCCA ACCAGGATCT TATCTATTCC GATTTAACCG CCGGTCGCCT GGATGCTGCA TTGCAGGATG AAGTCGCCGC CAGCGAAGGA TTCCTGAAGC AGCCAGCGGG CAAAGAGTAT GCGTTTGCCG GTCCTTCCGT GAAGGATAAA AAATATTTTG GCGACGGGAC GGGGGTTGGG CTGCGCAAAG ACGATACCGA GCTAAAAGCC GCGTTTGATA AAGCGCTGAC CGAACTGCGC CAGGACGGAA CTTACGACAA AATGGCCAAA AAGTACTTCG ATTTTAATGT CTACGGCGAT TGA
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Protein sequence | MKKTVLALSL LIGLGATAAS YAALPQTVRI GTDTTYAPFS SKDAKGEFIG FDIDLGNEMC KRMQVKCTWV ASDFDALIPS LKAKKIDAII SSLSITDKRQ QEIAFSDKLY AADSRLIAAK GSPIQPTLES LKGKHVGVLQ GSTQEAYAND NWRTKGVDVV AYANQDLIYS DLTAGRLDAA LQDEVAASEG FLKQPAGKEY AFAGPSVKDK KYFGDGTGVG LRKDDTELKA AFDKALTELR QDGTYDKMAK KYFDFNVYGD
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