Gene SeSA_A2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2583 
Symbol 
ID6517740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2467588 
End bp2468370 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content52% 
IMG OID642747632 
Productputative lysine-arginine-ornithine-binding periplasmic protein 
Protein accessionYP_002115424 
Protein GI194734670 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.17472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TGGCGTTATC CCTTTCTCTG GTGCTGGCAT TTTCCAGCGC TACCGCAGCA 
TTTGCCGCTA TTCCACAAAA GATTCGTATC GGTACCGATC CTACATACGC ACCGTTTGAA
TCCAAAAATG CACAAGGTGA ATTGGTCGGC TTTGATATCG ATCTGGCCAA AGAGCTGTGC
AAACGTATCA ACACACAGTG TACGTTCGTG GAAAACCCGC TGGATGCGCT GATTCCGTCT
TTAAAAGCGA AGAAAATTGA TGCCATCATG TCCTCGCTGT CCATCACTGA AAAGCGCCAG
CAGGAAATCG CGTTTACCGA CAAGCTTTAC GCCGCTGATT CCCGTCTGGT GGTGGCGAAG
AACTCTGATA TTCAGCCGAC CGTCGCGTCG CTGAAAGGCA AGCGCGTCGG CGTGCTACAG
GGGACAACGC AGGAGACCTT CGGCAATGAG CACTGGGCGC CGAAAGGGAT TGAGATCGTC
TCTTACCAGG GGCAGGACAA CATTTATTCC GATCTGACGG CTGGCCGTAT TGATGCAGCG
TTCCAGGACG AGGTCGCGGC CAGCGAAGGT TTCCTTAAAC AGCCCGTCGG AAAAGACTAT
AAATTCGGCG GCCCGGCGGT GAAAGATGAG AAGTTATTCG GCGTAGGAAC CGGTATGGGG
CTGCGCAAAG AGGATAACGA GCTGCGCGAA GCGCTGAACA AAGCCTTTGC TGAAATGCGT
GCTGACGGTA CTTACGAAAA GCTGGCGAAA AAGTACTTTG ATTTTGATGT TTATGGCGGT
TAA
 
Protein sequence
MKKLALSLSL VLAFSSATAA FAAIPQKIRI GTDPTYAPFE SKNAQGELVG FDIDLAKELC 
KRINTQCTFV ENPLDALIPS LKAKKIDAIM SSLSITEKRQ QEIAFTDKLY AADSRLVVAK
NSDIQPTVAS LKGKRVGVLQ GTTQETFGNE HWAPKGIEIV SYQGQDNIYS DLTAGRIDAA
FQDEVAASEG FLKQPVGKDY KFGGPAVKDE KLFGVGTGMG LRKEDNELRE ALNKAFAEMR
ADGTYEKLAK KYFDFDVYGG