Gene SeSA_A2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2569 
Symbol 
ID6519738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2456248 
End bp2457201 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content54% 
IMG OID642747618 
Producttransketolase domain protein 
Protein accessionYP_002115410 
Protein GI194736021 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3958] Transketolase, C-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.126502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.742091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGC TTGCGCCCGC AGGGCTTAAA GACGATATCG AAATGCGCAA AGTTTACGCC 
GGTTTTGTCG CCGGGCAGAT TGAGGCCGGA AGCCCAATTA TTGCGCTTGA GGCTGATTTA 
ATGAGCTCAA TGGCGATGGA TAGCGTGGCG CGTGACTACC CGCAGCATGT CATTAACTGC 
GGTATTATGG AGGCGAATGT GATTGGCACT GCGGCGGGGC TGGCGCTGAC CGGTCGTAAA 
CCGTTTGTGC ATACCTTTAC CGCTTTTGCC AGCCGTCGCT GTTTTGATCA GCTCTTCATG 
GCGCTGGATT ATCAGCGTAA CAACGTCAAA GTGATCGCCT CCGATGCCGG AGTGACGGCG 
TGCCATAACG GCGGCACCCA TATGTCTTTT GAAGATATGG GGATTGTTCG CGGGCTGGCG 
CACTCCGTAG TACTGGAGGT GACGGATGCG GTGATGTTCG CGGATATTTT ACGCCAGCTA 
ATGGACCTGG ACGGTTTTTA CTGGCTACGT ACTATCCGTA AGCAGGCGCG GAGTATCTAT 
GCGCCAGGCT CTACCTTTAC CATTGGCAAG GGCAACGTAC TGCGCGAGGG CGATGATATT 
ACGCTTATCG CCAACGGTAT TATGGTGACG GAGGCGCTGG AGGCGGCGCG CCAACTGGAG 
CAGGAAGGCG TGAGCGCCGC GGTCATTGAT ATGTTCACCT TAAAGCCTAT CGATCGCATG 
TTGGTGAAAA ACTACGCGGA AAAAACGCGG CGTATCGTCA CGTGTGAAAA CCACAGCATC 
CATAATGGAC TGGGGTCAGC GGTGGCAGAA GTGCTGGTGG AAAACTGCCC GGTGCCGATG 
CGCCGTGTTG GCGTCAAAGA GCGTTATGGG CAGGTAGGAA CGCAGGATTT CTTACAACAA 
GAGTACGGAC TCACCGCCGC AGCGATTGTA GAAGCCGCGA AATCACTGCT TTAA
 
Protein sequence
MIKLAPAGLK DDIEMRKVYA GFVAGQIEAG SPIIALEADL MSSMAMDSVA RDYPQHVINC 
GIMEANVIGT AAGLALTGRK PFVHTFTAFA SRRCFDQLFM ALDYQRNNVK VIASDAGVTA 
CHNGGTHMSF EDMGIVRGLA HSVVLEVTDA VMFADILRQL MDLDGFYWLR TIRKQARSIY 
APGSTFTIGK GNVLREGDDI TLIANGIMVT EALEAARQLE QEGVSAAVID MFTLKPIDRM 
LVKNYAEKTR RIVTCENHSI HNGLGSAVAE VLVENCPVPM RRVGVKERYG QVGTQDFLQQ 
EYGLTAAAIV EAAKSLL