Gene SeSA_A2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2559 
Symbol 
ID6516496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2445094 
End bp2446308 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content52% 
IMG OID642747608 
Productaminotransferase AlaT 
Protein accessionYP_002115400 
Protein GI194734179 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00595709 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA TTGAAAAATC CAGCAAACTC GAAAATGTCT GTTATGACAT TCGTGGCCCC 
GTTCTGAAAG AAGCGAAACG CCTTGAGGAA GAAGGTAATA AAGTTCTTAA ACTGAATATC 
GGCAACCCCG CCCCCTTCGG ATTCGAAGCG CCGGACGAAA TTCTGGTCGA TGTCATTCGT 
AATTTGCCGA CGGCGCAAGG ATATTGCGAC TCGAAAGGGC TTTATTCCGC CCGTAAAGCA 
ATTATGCAGC ATTATCAGGC CCGTGGAATG CGCGATGTAA CCGTGGAAGA TATCTATATC 
GGTAACGGCG TTTCCGAGCT GATCGTTCAG GCGATGCAGG CGTTGCTTAA CAGTGGCGAT 
GAAATGCTGG TTCCCGCGCC CGATTATCCG TTATGGACAG CGGCGGTATC GCTCTCCAGC 
GGCAAGGCGG TACATTATCT TTGCGATGAA TCTTCCGACT GGTTCCCGGA CCTTGACGAT 
ATCCGCGCCA AAATCACCCC ACGTACGCGT GGTATTGTCA TTATTAATCC AAACAACCCT 
ACTGGCGCCG TCTATTCTAA AGAATTGTTG ATGGAAATTG TCAACATTGC GCGCGAGCAT 
AATCTCATCA TCTTCGCCGA TGAAATTTAT GACAAGATTC TCTATGACGA TGCCGAGCAT 
CACTCTATCG CCGCACTGGC GCCTGATCTG CTGACCATCA CCTTTAATGG GTTGTCTAAA 
ACCTATCGCG TCGCCGGCTT CCGCCAGGGC TGGATGGTGC TGAACGGGCC GAAAAAACAT 
GCGAAGGGCT ATATTGAAGG ACTGGAGATG TTAGCCTCAA TGCGCCTGTG CGCCAACGTC 
CCGGCGCAAC ATGCTATTCA GACCGCGCTC GGCGGCTATC AAAGCATTAG CGAATTTATT 
CTGCCGGGCG GCCGACTGTA TGAACAGCGT AACCGCGCCT GGGAGTTGAT TAACGATATC 
CCCGGCGTTT CCTGCGTAAA ACCGCGCGGC GCGTTGTACA TGTTCCCCAG GATCGACGCT 
AAACGTTTTA ATATTCACGA TGACCAGAAG ATGGTGCTGG ACTTCCTGCT ACAGGAAAAG 
GTGCTGCTGG TGCAAGGTAC CGCCTTTAAC TGGCCGTGGC CGGATCACTT CCGCATTGTG 
ACGCTACCGC GTGAAGATGA CCTGGAGATG GCCATCAACC GTTTTGGGCG TTTCCTCTCA 
GGTTACCATC AATAA
 
Protein sequence
MSPIEKSSKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFEA PDEILVDVIR 
NLPTAQGYCD SKGLYSARKA IMQHYQARGM RDVTVEDIYI GNGVSELIVQ AMQALLNSGD 
EMLVPAPDYP LWTAAVSLSS GKAVHYLCDE SSDWFPDLDD IRAKITPRTR GIVIINPNNP 
TGAVYSKELL MEIVNIAREH NLIIFADEIY DKILYDDAEH HSIAALAPDL LTITFNGLSK 
TYRVAGFRQG WMVLNGPKKH AKGYIEGLEM LASMRLCANV PAQHAIQTAL GGYQSISEFI 
LPGGRLYEQR NRAWELINDI PGVSCVKPRG ALYMFPRIDA KRFNIHDDQK MVLDFLLQEK 
VLLVQGTAFN WPWPDHFRIV TLPREDDLEM AINRFGRFLS GYHQ