| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2527 |
|---|
| Symbol | |
|---|
| ID | 6516746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 2411995 |
|---|
| End bp | 2413977 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642747577 |
|---|
| Product | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase |
|---|
| Protein accession | YP_002115369 |
|---|
| Protein GI | 194736015 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase
[COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCG TTATTTTTGC CTATCACGAT ATGGGATGTC AGGGTGTGCA GGCCGTACTG
GATGCCGGGT ATGAGATTGC CGCGATTTTC ACTCATGCCG ACAATCCTGC GGAAAACACC
TTTTTTGGCT CCGTCTCCCG GCTGGCGGCA GAATTAGGGA TTCCGGTTTA TGCGCCGGAT
AACGTAAACC ATCCTATCTG GGTCGACCGC ATCGCTGAAC TTGCGCCGGA TATTATTTTT
TCGTTCTATT ACCGCAACCT GTTAAGCGAA GAAATTCTGC ACCTCGCCCC GGCTGGCGCG
TTCAATCTGC ACGGTTCTCT ATTGCCTGCC TATCGTGGCC GTGCGCCGCT AAACTGGGTT
CTGGTTAACG GCGAAAGCGA AACGGGCGTA ACGCTGCATC GTATGGTCAA ACGTGCCGAC
GCCGGAGAGA TTGTCGCCAG TCAACGCGTT GCTATTGCGC AGGACGATGT TGCGCTTACC
CTGCATCATA AGCTATGTCA GGCCGCGCGC CAGTTGCTTA ATAGCATCCT GCCCACCATG
AAATGCGGCG ATATACCTTC TGTTCCCCAG CGAGAGTCTG ACGCTACATA TTATGGTCGC
CGCAGGCCGG AAGATGGCCT TATCGACTGG CACAAACCGG TTTCCACGGT GCATAACCTG
GTGCGGGCGG TAGCCGCCCC CTGGCCCGGC GCGTTCAGCT ATAACGGCTC GCAAAAATTC
ACTATCTGGT CTTCCCGAAT TTGTCCGGAT GCGCAGGGCG CGCTTCCCGG CTCGGTAATT
TCGGTCTCTC CGCTGCGGGT CGCCTGCGCC GATGGCGCGC TGGAGATTAT TACCGGCCAG
GCCGGAGACG GCATTACTGT ACAGGGCTCG CAGCTTGCAC AGACGCTTGG TCTGGTGGCG
GGCGCGCGTT TGAACCGTCC ACCAGCGACC AGCGGTAAAC GTCGCATTCG CGTTCTCATC
CTCGGCGTCA ACGGTTTTAT CGGCAATCAT TTGACCGAAC GGTTACTGAA TGAAGAGAAT
TACGAGGTCT ACGGTATGGA TATCGGCAGC AACGCCATTA GCCGATTCCT GCTCCACCCT
CGCTTTCATT TCGTGGAGGG AGATATCAGC ATCCACTCAG AATGGATCGA ATACCATGTC
AAAAAATGCG ATGTCGTACT GCCGCTGGTA GCAATTGCTA CCCCGATTGA ATACACCCGC
AACCCGCTGC GCGTCTTTGA ACTTGATTTT GAAGAAAACC TGCGGATTAT CCGTTATTGC
GTGAAATACC GTAAACGCGT GGTTTTCCCG TCTACCTCTG AAGTGTACGG CATGTGTACG
GACGCCTCTT TTGACGAGGA TAAATCGAAT CTGATCGTCG GTCCGGTGAA TAAGCCACGC
TGGATTTACT CCGTTTCCAA ACAGCTTCTC GACCGGGTGA TTTGGGCTTA TGGCGAAAAA
GAGGGATTGC GCTTCACGCT TTTCCGTCCC TTTAACTGGA TGGGGCCGCG GCTGGATAGC
CTGAACGCGG CGCGTATCGG CAGTTCACGC GCGATAACGC AGTTGATTCT GAACCTGGTA
GAAGGGACGC CGATAAAGCT TATCGACGGC GGTCAGCAGA AGCGCTGCTT CACCGATATT
CGTGACGGGA TCGAAGCCTT ATTCCGCATT ATTGTGAATG ATGGCGATCG GTGCGATGGC
AAAATCATTA ATATCGGCAA CCCTGACAAC GAAGCCAGTA TTCAGGAACT GGCGACGCTG
TTGCTCGACA GTTTTGATAA GCATCCGCTG CGCTGCCATT TCCCACCGTT TGCCGGTTTC
CAGGTCGTCG AAAGCCGTAG TTATTACGGC AAGGGTTATC AGGATGTCGC ACACCGGAAA
CCCAGTATCG ACAATGCCAG GCGCTGTCTG GACTGGGAAC CGTCTATTGC GATGCGGGAT
ACGGTTGAAG AAACGCTGGA CTTCTTTTTG CGCAGCGTAG ATATCGCGGA ACGCGCATCA
TGA
|
|---|
| Protein sequence | MKAVIFAYHD MGCQGVQAVL DAGYEIAAIF THADNPAENT FFGSVSRLAA ELGIPVYAPD
NVNHPIWVDR IAELAPDIIF SFYYRNLLSE EILHLAPAGA FNLHGSLLPA YRGRAPLNWV
LVNGESETGV TLHRMVKRAD AGEIVASQRV AIAQDDVALT LHHKLCQAAR QLLNSILPTM
KCGDIPSVPQ RESDATYYGR RRPEDGLIDW HKPVSTVHNL VRAVAAPWPG AFSYNGSQKF
TIWSSRICPD AQGALPGSVI SVSPLRVACA DGALEIITGQ AGDGITVQGS QLAQTLGLVA
GARLNRPPAT SGKRRIRVLI LGVNGFIGNH LTERLLNEEN YEVYGMDIGS NAISRFLLHP
RFHFVEGDIS IHSEWIEYHV KKCDVVLPLV AIATPIEYTR NPLRVFELDF EENLRIIRYC
VKYRKRVVFP STSEVYGMCT DASFDEDKSN LIVGPVNKPR WIYSVSKQLL DRVIWAYGEK
EGLRFTLFRP FNWMGPRLDS LNAARIGSSR AITQLILNLV EGTPIKLIDG GQQKRCFTDI
RDGIEALFRI IVNDGDRCDG KIINIGNPDN EASIQELATL LLDSFDKHPL RCHFPPFAGF
QVVESRSYYG KGYQDVAHRK PSIDNARRCL DWEPSIAMRD TVEETLDFFL RSVDIAERAS
|
|---|
| |