| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2512 |
|---|
| Symbol | glpA |
|---|
| ID | 6519309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 2396013 |
|---|
| End bp | 2397641 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642747562 |
|---|
| Product | sn-glycerol-3-phosphate dehydrogenase subunit A |
|---|
| Protein accession | YP_002115354 |
|---|
| Protein GI | 194735790 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03377] glycerol-3-phosphate dehydrogenase, anaerobic, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC GCGACTCGCA AGCAAGTGAC GTGATTATCA TTGGCGGTGG AGCAACAGGC
GCAGGGATCG CCCGCGACTG CGCGCTGCGC GGTTTACGTG TCATTCTGGT GGAGCGGCAT
GATATAGCGA CTGGCGCGAC CGGGCGTAAC CACGGGCTGC TGCACAGCGG CGCTCGTTAT
GCGGTTACCG ACGCGGAATC CGCGCGCGAG TGCATTAGTG AAAACCAGAT TTTAAAACGG
ATCGCCCGCC ATTGCGTCGA ACCGACGGAT GGTCTGTTTA TTACGTTGCC GGAAGATGAT
CTTGCGTTTC AGGCCACCTT TATTCGCGCC TGTGAAGCGG CGGGCATTCG CGCTGAAGCC
ATCGATCCGC AGCAGGCTCG CATCATCGAA CCTTCCGTTA ACCCTGCGCT CATCGGTGCG
GTAAAAGTGC CGGATGGCAC CGTGGACCCT TTCCGCCTTA CCGCCGCCAA TATGCTGGAT
GCCAGAGAAC ATGGCGCAAT CGTGTTAACG GCGCATGAAG TGACCGGGCT CATTCGTGAA
GGCGCAACGG TCTGTGGCGT CCATGTGCGC AACCATCTCA CTGGCGAAAC CCAGACGCTT
CACGCGCCGG TGGTGGTCAA TGCGGCTGGT ATCTGGGGGC AACGGATCGC CGAATACGCC
GACCTGAGTA TTCGCATGTT CCCGGCGAAA GGCTCACTGT TGATCATGGA CCATCGGATC
AACCAGCATG TCATTAACCG CTGCCGGAAA CCATCGGATG CCGACATTCT GGTACCTGGC
GATACGATTT CACTGATCGG CACTACCTCT ACCCATATTG ATTACAATGA GATAGACAGC
AACCGCGTCA CCGCAGATGA AGTCGATATC CTGCTGCGTG AAGGGGAAAA ACTGGCCCCT
GTCATGGCGA AGACGCGTAT TCTGCGCGCG TATTCCGGCG TCCGCCCGCT GGTGGCCAGT
GATGACGATC CCAGCGGTCG TAACGTCAGC CGCGGTATTG TGTTGTTCGA CCACGCCGAA
CGCGACGGGC TTGAAGGCTT CATTACCATT ACCGGCGGGA AGCTAATGAC TTACCGCCTG
ATGGCGGAAT GGGCGACCGA CGCCGTGTGC CGCAAGTTGG GCAATACTCG CCCCTGCATC
ACGGCGGATA CGCCGTTGCC TGGCTCAAAA GAGTCTACGG AACATACGCT GAAACGCATT
ATCTCGCTTC CCGCGCCGCT ACGCGGATCG GCGGTTTATC GGCATGGCGA TCGCACGCCG
GGGTGGCTGA GCGAAGGCCG CCAACACCGT AGCCTGGTCT GTGAATGCGA GGCCGTCACG
GCGGGAGAAG TGCAGTATGC CGTCGAAAAC TTAACCGTGA ATAGCCTGCT GGATCTGCGT
CGTCGCACCC GCGTAGGGAT GGGCACTTGC CAGGGCGAGC TGTGCGCCTG CCGCGCGGCC
GGGCTATTGC AGCGTTTTAA TGTGACGACC GCGGCGCAAT CTATTACGCA ACTCTCTGAA
TTTCTGAATG AGCGCTGGAA AGGCGTACAA CCTGTCGCCT GGGGAGACGC GCTGCGCGAA
AGCGAATTCA CGCGCTGGGT TTATCAGGGA TTATGCGGTC TGGAGAAGGA GCACCAGGAT
GAAATTTGA
|
|---|
| Protein sequence | MKIRDSQASD VIIIGGGATG AGIARDCALR GLRVILVERH DIATGATGRN HGLLHSGARY
AVTDAESARE CISENQILKR IARHCVEPTD GLFITLPEDD LAFQATFIRA CEAAGIRAEA
IDPQQARIIE PSVNPALIGA VKVPDGTVDP FRLTAANMLD AREHGAIVLT AHEVTGLIRE
GATVCGVHVR NHLTGETQTL HAPVVVNAAG IWGQRIAEYA DLSIRMFPAK GSLLIMDHRI
NQHVINRCRK PSDADILVPG DTISLIGTTS THIDYNEIDS NRVTADEVDI LLREGEKLAP
VMAKTRILRA YSGVRPLVAS DDDPSGRNVS RGIVLFDHAE RDGLEGFITI TGGKLMTYRL
MAEWATDAVC RKLGNTRPCI TADTPLPGSK ESTEHTLKRI ISLPAPLRGS AVYRHGDRTP
GWLSEGRQHR SLVCECEAVT AGEVQYAVEN LTVNSLLDLR RRTRVGMGTC QGELCACRAA
GLLQRFNVTT AAQSITQLSE FLNERWKGVQ PVAWGDALRE SEFTRWVYQG LCGLEKEHQD
EI
|
|---|
| |