Gene SeSA_A2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2490 
Symbol 
ID6517513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2368259 
End bp2368909 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content59% 
IMG OID642747545 
Productalpha-ketoglutarate-dependent dioxygenase AlkB 
Protein accessionYP_002115337 
Protein GI194735473 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID[TIGR00568] DNA alkylation damage repair protein AlkB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATC TATTTGCTGA TGAAGCGCCC TGGCAAGAGC CCCTGGCGCC TGGCGCGGTG 
GTGTTGCGCC GCTTTGCGTT TCGCGCGGCG CAGTCGCTAT TAGACGATAT CGGGTTTGTC
GCCAGTCAGT CTCCGTTTCG TCAGATGGTG ACGCCGGGCG GCTACACCAT GTCGGTGGCG
ATGACCAACT GCGGCGCGTT AGGGTGGACC ACCGATCGTC ACGGTTATTG TTATGCCGTG
CGCGATCCGT TGACCGATAA ACCCTGGCCT GCGCTGCCGT TATCGTTTGC CAGCGTATGT
CGTCAGGCGG CAATCGCGGC AGGGTATGCG AGCTTCCAAC CGGACGCCTG CCTGATCAAT
CGCTACGCGC CCGGCGCAAA ACTGTCGCTG CATCAGGATA AAGACGAGCC GGATCTGCGC
GCGCCTATCG TCTCAGTTTC GTTGGGGGTG CCGGCGATTT TTCAGTTTGG CGGCCTGCGT
CGCAGCGATC CGCTCCAGCG GATCTTACTG GAGCATGGCG ATATCGTGGT CTGGGGCGGC
GAGTCCCGGC TGTTTTATCA TGGTATCCAG CCGCTTAAAG CGGGCTTTCA TCCCATGACC
GGTGAATTTC GTTACAATCT CACCTTCCGT CAGGCGGCTG AAAAAGAATA A
 
Protein sequence
MLDLFADEAP WQEPLAPGAV VLRRFAFRAA QSLLDDIGFV ASQSPFRQMV TPGGYTMSVA 
MTNCGALGWT TDRHGYCYAV RDPLTDKPWP ALPLSFASVC RQAAIAAGYA SFQPDACLIN
RYAPGAKLSL HQDKDEPDLR APIVSVSLGV PAIFQFGGLR RSDPLQRILL EHGDIVVWGG
ESRLFYHGIQ PLKAGFHPMT GEFRYNLTFR QAAEKE