Gene SeSA_A2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2447 
Symbol 
ID6516835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2328189 
End bp2329370 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content54% 
IMG OID642747504 
Productsugar efflux transporter B 
Protein accessionYP_002115297 
Protein GI194735915 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00899] sugar efflux transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.018902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.791409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACA GTCCCGCCGC CGCTGCGCCT AAATCATTTG ACCTGACGTC TACCGCCTTT 
TTGATCGTCG CTTTTCTCAC CGGTATTGCC GGTGCGTTAC AGACGCCGAC GCTCAGTATT
TTTCTGACGG ATGAGGTTCA CGCCCGTCCC GGCATGGTGG GATTCTTTTT TACCGGCAGC
GCGGTTATCG GCATTATCGT GAGCCAGTTT CTGGCGGGTC GCTCAGATAA AAAAGGCGAT
CGCAAAAAAC TGATCGTTTT CTGTTGCGTG CTGGGCATGT TGGCCTGCGT GTTGTTTGCC
TGGAACCGCA ACTACTTTAT TTTGCTGTTC ATCGGCGTCT TTCTCAGTAG CTTCGGCTCT
ACCGCCAACC CGCAGATGTT TGCGCTGGCC CGTGAACATG CCGATCGTAC AGGTCGTGAA
GCGGTGATGT TCAGCTCAAT CCTCCGCGCC CAGGTCTCAT TGGCCTGGGT CATTGGGCCG
CCGCTGGCCT ATGCGCTGGC GATGGGTTTT AGCTTTACGG TGATGTATTT GAGCGCGGCG
GTAGCTTTTA TCGTCTGCGG CGTCATGGTG TGGTTCTTTT TACCGTCAAT GCGCAAAGAT
GCGCCGCTGG CAACCGGCAC GCTGGAAGCA CCGCGTCGTA ATCGCCGCGA TACGCTGTTG
CTGTTTGTCA TCTGTACGTT AATGTGGGGA ACTAACAGCC TGTATATCAT TAATATGCCG
CTGTTTATCA TCAATGAGCT GCATCTTCCG GAAAAACTTG CAGGCGTGAT GATGGGCACC
GCCGCCGGGC TGGAGATTCC CACAATGCTG ATTGCAGGTT ACTTCGCCAA ACGGTTGGGA
AAACGCCTGT TAATGTGCAT CGCCGTTGTC GCCGGACTGT GCTTTTATGC GGGTATGTTG
CTGGCGCACG CACCGGCGAC GTTGCTCGGC TTGCAGTTGC TGAACGCGAT TTACATCGGC
ATTCTTGGCG GGATTGGCAT GCTCTATTTT CAGGATCTGA TGCCAGGCCA GGCGGGTTCA
GCCACCACGC TGTATACCAA TACCATTCGC GTCGGCTGGA TCATTGCCGG TTCGTTGGCG
GGAATCGCCG CAGAAATCTG GAATTATCAT GCGGTCTTCT GGTTTGCGTT AGTCATGATT
GTCGCCACCA TGTTCTGCCT GGCGCGTATT AAAGATGTTT AA
 
Protein sequence
MHNSPAAAAP KSFDLTSTAF LIVAFLTGIA GALQTPTLSI FLTDEVHARP GMVGFFFTGS 
AVIGIIVSQF LAGRSDKKGD RKKLIVFCCV LGMLACVLFA WNRNYFILLF IGVFLSSFGS
TANPQMFALA REHADRTGRE AVMFSSILRA QVSLAWVIGP PLAYALAMGF SFTVMYLSAA
VAFIVCGVMV WFFLPSMRKD APLATGTLEA PRRNRRDTLL LFVICTLMWG TNSLYIINMP
LFIINELHLP EKLAGVMMGT AAGLEIPTML IAGYFAKRLG KRLLMCIAVV AGLCFYAGML
LAHAPATLLG LQLLNAIYIG ILGGIGMLYF QDLMPGQAGS ATTLYTNTIR VGWIIAGSLA
GIAAEIWNYH AVFWFALVMI VATMFCLARI KDV