Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2438 |
Symbol | |
ID | 6515275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2317018 |
End bp | 2318970 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642747495 |
Product | colicin I receptor |
Protein accession | YP_002115288 |
Protein GI | 194735726 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.593043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAG TTACGTTGGC CTGGCCGGTT GCCGCGGCAA CGGATGATGG TGAAACCATG GTCGTTACCG CGTCCGCTAT TGAACAAAAT CTGAAAGATG CGCCAGCAAG TATCAGCGTC ATTACCCAGC AAGATTTACA GCGCAGGCCC GTGCAAAACC TGAAAGATGT CCTGAAAGAG GTGCCGGGCG TACAGCTCAC TAACGAAGGG GATAACCGTA AAGGCGTGAG TATTCGTGGT CTGGACAGCA GTTATACGCT GATCCTGATC GACGGTAAGC GCGTTAACTC CCGTAACGCG GTCTTCCGCC ATAATGATTT TGATCTGAAC TGGATACCGG TTGACGCTAT CGAACGCATT GAAGTGGTGC GTGGCCCCAT GTCCTCGCTG TATGGCTCCG ATGCGCTGGG CGGCGTGGTC AACATTATTA CCAAAAAAAT TGGTCAGAAA TGGCACGGTA GCGTCACGGT TGACTCCACT ATTCAGGAAC ATCGCGACCG TGGCGATACC TATAACGGCC AGTTCTTTAC CAGCGGTCCG CTGATCGACG GCGTGCTGGG AATGAAAGCC TACGGTAGCC TGGCGAAACG CGGAAAAGAC GAGCAGCAGA GTTCCGCCAC CACCGCTACG GGTGAAACGC CGCGCATTGA AGGATTTACC AGCCGGGATG GAAACGTCGA GTTTGCCTGG ACACCAAACG AAAATCATGA CGTTACCGCA GGCTACGGTT TTGATCGCCA GGACCGGGAC TCCGACTCGC TGGATAAAAA CCGTCTGGAA CGGCAAAACT ACGCGTTGAG CCATAACGGA CGTTGGGATC TCGGTAACAG CGAGCTCAAG TTCTACGGCG AAAAAGTGGA AAACAAAAAC CCCGGCAACA GTAGCCCTAT CACGTCAGAA AGCAATTCGA TTGACGGGAA ATACGTTCTG CCGTTAGCGT CTGTCAACCA GTTCCTCACC TTCGGCGGCG AATGGCGTCA CGATAAACTG AGCGATGCGG TCAACCTGAC CGGCGGTTCC AGTACTAAAA CCTCCGCCAG CCAGTATGCT CTGTTCCTTG AAGATGAGTG GCGCATCTTC GAACCGCTGG CGCTGACCAC CGGTATTCGT ATGGATGACC ATGAAACCTA TGGCGATCAC TGGAGCCCGC GTGCTTATCT GGTCTATAAC GCAACGGATA CCCTGACGGT GAAAGGTGGG TGGGCCACGG CCTTTAAAGC GCCGTCGCTA TTGCAATTAA GTCCGGACTG GGCGACCAAC TCCTGCCGTG GAGGATGCCG CATTATCGGT AGCCCGGATC TGAAACCTGA AACCAGTGAA AGCTGGGAGC TCGGCCTTTA CTACCGTGGC GAAGAAGGCA TACTGGAGGG CGTGGAAGCG AGCGTTACCA CGTTCCGTAA CGATGTGGAC AATCGCATCA GCATTAGCCG TACCGCTGAC GTTAACGCCG CGCCCGGCTA TTCCAACTTT GTCGGTTTCG AAACCAATAG TCGGGGACAG CGCGTTCCGG TCTTCCGTTA TTACAACGTG AATAAAGCGC GTATTCAGGG CGTGGAAACC GAGTTGAAAG TTCCGTTTAA CGAGGCGTGG AAACTGTCGT TGAATTACAC CTATAACGAC GGACGCGACG TCAGTAATGG CGGGAACAAG CCGCTTTCCG ATCTGCCGTT CCACACCGCG AACGGTACGC TGGACTGGAA ACCGGTGCAG CTCGAAGACT GGTCATTCTA CGTATCAGGG AATTATACCG GGCGTAAGCG GGCCGACAGC GCAACGGCGA AAACGCCGGG TGGGTACGTG GTCTGGGATA CCGGCGCGGC ATGGCAGGCG ACGAAAAATG TTAAACTGCG TGCGGGCGTT CTGAACGTGG GCGATAAAGA TCTCAAACGC GACGACTACG GTTACACCGA AGACGGACGT CGTTACTTTA TGGCGGTGGA TTACCGTTTC TGA
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Protein sequence | MSAVTLAWPV AAATDDGETM VVTASAIEQN LKDAPASISV ITQQDLQRRP VQNLKDVLKE VPGVQLTNEG DNRKGVSIRG LDSSYTLILI DGKRVNSRNA VFRHNDFDLN WIPVDAIERI EVVRGPMSSL YGSDALGGVV NIITKKIGQK WHGSVTVDST IQEHRDRGDT YNGQFFTSGP LIDGVLGMKA YGSLAKRGKD EQQSSATTAT GETPRIEGFT SRDGNVEFAW TPNENHDVTA GYGFDRQDRD SDSLDKNRLE RQNYALSHNG RWDLGNSELK FYGEKVENKN PGNSSPITSE SNSIDGKYVL PLASVNQFLT FGGEWRHDKL SDAVNLTGGS STKTSASQYA LFLEDEWRIF EPLALTTGIR MDDHETYGDH WSPRAYLVYN ATDTLTVKGG WATAFKAPSL LQLSPDWATN SCRGGCRIIG SPDLKPETSE SWELGLYYRG EEGILEGVEA SVTTFRNDVD NRISISRTAD VNAAPGYSNF VGFETNSRGQ RVPVFRYYNV NKARIQGVET ELKVPFNEAW KLSLNYTYND GRDVSNGGNK PLSDLPFHTA NGTLDWKPVQ LEDWSFYVSG NYTGRKRADS ATAKTPGGYV VWDTGAAWQA TKNVKLRAGV LNVGDKDLKR DDYGYTEDGR RYFMAVDYRF
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