Gene SeSA_A2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2420 
Symbol 
ID6518849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2298388 
End bp2298786 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content47% 
IMG OID642747477 
Producthypothetical protein 
Protein accessionYP_002115270 
Protein GI194734474 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.581349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT CACTGAATAT TATCTGGCAA TATATACGCG CTTTTGTATT GATTTATGCC 
TGTTTGTACG CAGGCATTTT TCTTGCATCA CTGCTTCCTA TCACTATTCC CGGCAGCATT 
ATCGGGATGT TAATTCTGTT TGTGTTGCTG GCGCTGCAAA TTCTGCCGGC AAAGTGGGTT 
AACCCCGGCT GTTATGTGCT GATTCGTTAT ATGGCGTTGC TGTTTGTGCC GATTGGCGTT 
GGGGTCATGC AATATTTTGA CTTACTGCGC GCGCAATTCG GCCCGGTGGT GGTCTCTTGC 
GCTATCAGTA CGCTGGTCGT TTTTGTGGTC GTAAGCTGGA GTTCACATCT GATACACGGT 
GAGCGTAAAG TGGTTGGGCA GAAGGGAACG AAAAAATGA
 
Protein sequence
MSKSLNIIWQ YIRAFVLIYA CLYAGIFLAS LLPITIPGSI IGMLILFVLL ALQILPAKWV 
NPGCYVLIRY MALLFVPIGV GVMQYFDLLR AQFGPVVVSC AISTLVVFVV VSWSSHLIHG 
ERKVVGQKGT KK