Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2413 |
Symbol | |
ID | 6517175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2291190 |
End bp | 2292128 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642747471 |
Product | tRNA-dihydrouridine synthase C |
Protein accession | YP_002115264 |
Protein GI | 194735562 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.167319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTTT TACTGGCGCC GATGGAAGGC GTGCTCGACG CGTTAGTGCG CGAGCTGCTG ACCGAAGTGA ATGATTACGA TCTCTGCATC ACCGAATTTG TGCGCGTGGT GGATCAGCTG CTGCCGGTAA AAGTGTTTCA TCGCATCTGC CCGGAGTTGC ATCATGCCAG CCGCACGCCG TCCGGCACGC CGGTGCGTAT TCAGCTTCTG GGCCAGCATC CGCAGTGGCT GGCGGAAAAC GCCGCGCGGG CGACGGCGTT GGGATCGTAT GGCGTGGACC TGAACTGCGG CTGTCCGTCA AAAGTGGTGA ACGGCAGCGG CGGCGGCGCG ACATTGCTCA AAGATCCCGA ACTCATCTAT CAGGGCGCGA AAGCGATGCG GGCCGCGGTA CCGTCGCATC TTCCGGTGAC GGTAAAAGTG CGTCTCGGCT GGGATAGCGG CGATAGAAAA TTTGAAATCG CCGATGCGGT GCAGCAGGCC GGCGCCAGTG AACTGGTGGT GCATGGCCGT ACCAAAGCGC AGGGCTACCG CGCCGAGCAT ATCGACTGGC AGGCGATCGG TGAAATACGC CAGCGTCTGA CTATTCCGGT TATCGCGAAT GGCGAAATCT GGGACTGGCA GAGCGCGCAG GCATGTATGG CGGCCAGCGG CTGCGATGCG GTGATGATTG GCCGTGGGGC GTTAAATATT CCTAACCTGA GCCGGGTGGT GAAGTATAAC GAACCGCGTA TGCCGTGGCC GGAAGTGGTT GCATTATTAC AAAAATATAC CCGACTGGAA AAGCAGGGCG ATACCGGTTT ATACCATGTC GCGCGTATTA AACAGTGGTT GGGATATTTA CGTAAGGAAT ATATTGAGGC GACGGAACTC TTTCAGTCGA TTCGGGCGTT AAACCGTTCG TCCGAGATTG CGCGGGCGAT TCAGGCTATT AAAATCTAA
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Protein sequence | MRVLLAPMEG VLDALVRELL TEVNDYDLCI TEFVRVVDQL LPVKVFHRIC PELHHASRTP SGTPVRIQLL GQHPQWLAEN AARATALGSY GVDLNCGCPS KVVNGSGGGA TLLKDPELIY QGAKAMRAAV PSHLPVTVKV RLGWDSGDRK FEIADAVQQA GASELVVHGR TKAQGYRAEH IDWQAIGEIR QRLTIPVIAN GEIWDWQSAQ ACMAASGCDA VMIGRGALNI PNLSRVVKYN EPRMPWPEVV ALLQKYTRLE KQGDTGLYHV ARIKQWLGYL RKEYIEATEL FQSIRALNRS SEIARAIQAI KI
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