| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2389 |
|---|
| Symbol | |
|---|
| ID | 6519673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 2266815 |
|---|
| End bp | 2267495 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642747447 |
|---|
| Product | pilus assembly chaperone |
|---|
| Protein accession | YP_002115240 |
|---|
| Protein GI | 194737456 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA TGATTGCATT ATGCCTGGCT TGTGCCGCTA TGCCTGCGTG GAGCGGCATT
TATATATATG GTACACGTAT TATTTATCCG GCGCAGAAAA AAGATATTAC CGTACAATTA
ATGAATGACG GTAAACGAAG CTCACTCATC CAGGCGTGGA TTGATAACGG TGATACCAGC
CTGCCGCCAG AAAAATTACA GGTTCCATTT ATTATGACCC CACCTGTAAT TAGAGTCGCG
GCAAATTCAG GTCAGCAATT AAAAATAAAA AAACTCGCTA ATAACTTGCC TGGCGATCGT
GAAAGTCTTT TCTACCTCAA TGTACTGGAT ATTCCACCAA ATTCAGACGA GAACAAAGAT
AAAAACATTA TTAAATTTGC GCTACAAAAC CGGATAAAGT TGATCTATCG CCCACCGGGG
GTACAGAAAG TCGATAAAGC AACATTTTCC CGCTTGCAGT TGCTTCGTGC GCCAGGGAGT
ATTAGCGTGA AAAATAATTC CGCAAACTGG ATCACTATTC CAGAAGTTAA AGCAAAAAGT
AAAGTAAATA AAGAAACCTT ATTACTGGCT CCATGGTCAT CGCAGAGTAT CACCACAACG
GCAGTTGTAA ATAGTTATAC CGTGACGCTA ATTGATGATT CTGGGAATTA TTTAAACGAG
ACTATCAAAA TAGAAAATTA A
|
|---|
| Protein sequence | MKRMIALCLA CAAMPAWSGI YIYGTRIIYP AQKKDITVQL MNDGKRSSLI QAWIDNGDTS
LPPEKLQVPF IMTPPVIRVA ANSGQQLKIK KLANNLPGDR ESLFYLNVLD IPPNSDENKD
KNIIKFALQN RIKLIYRPPG VQKVDKATFS RLQLLRAPGS ISVKNNSANW ITIPEVKAKS
KVNKETLLLA PWSSQSITTT AVVNSYTVTL IDDSGNYLNE TIKIEN
|
|---|
| |