| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2383 |
|---|
| Symbol | thiM |
|---|
| ID | 6515928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 2261697 |
|---|
| End bp | 2262494 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642747442 |
|---|
| Product | hydroxyethylthiazole kinase |
|---|
| Protein accession | YP_002115235 |
|---|
| Protein GI | 194735759 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2145] Hydroxyethylthiazole kinase, sugar kinase family |
|---|
| TIGRFAM ID | [TIGR00694] hydroxyethylthiazole kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.816494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCTG ACCTGCACTG CCGCACGCTT GCGGCGCATA CGTTAAAACA CTTTCGCGCG
CTCTCCCCGC TTACGCACTG TATGACGAAT GACGTCGTAC AAACGTTTAC CGCCAATACG
TTGCTGGCGC TGGGCGCTTC ACCCGCCATG GTGATTGATC CTGTCGAGGC CAGACCGTTT
GCCGCCATCG CCAACGCCTT GCTGGTTAAT GTCGGAACAT TAACCGCCTC ACGCGCTGAA
GCGATGCGTG CGGCGGTAGA AAGCGCTTAT GATGCCAAAA CGCCGTGGAC GCTTGATCCT
GTCGCAGTAG GCGCGCTGGA ATTTCGTCGG CGATTTTGCC TGGATCTCTT GTCCCTGCGC
CCGGCGGCAA TACGCGGCAA CGCCTCGGAA ATCCTGGCGT TATCCGGCAT GGCGCTGGGC
GGACGCGGCG TAGATACCAC CGAGGCGGCG TTGGCCGCAC TGCCTGCGGC GCAGGCGCTG
GCGCGTCAGA TAGACTGCAT CGTGGTGGTC ACCGGCGAGG TAGATTACGT CACTAACGGT
CAGCGCACGC TGAGCATTCC CGGCGGCGAT CCGTTAATGA CTCGCATTGT AGGCACCGGC
TGCGCGTTGT CGGCGGTCGT CGCCGCCAGT TGCGCGTTAC CGGGCGCCGC GCTGGACAAT
GTCGCGTCGG CCTGCTGCTG GATGAAACTG GCTGGACAGA CCGCGGCAGA GCGTAGCGAA
GGACCGGGCA GCTTCATCCC GGCTTTTCTT GATGCGCTCT ATCATCTGGA TGTAGAGGCG
GCCAATGAAG AGAATTAA
|
|---|
| Protein sequence | MQPDLHCRTL AAHTLKHFRA LSPLTHCMTN DVVQTFTANT LLALGASPAM VIDPVEARPF
AAIANALLVN VGTLTASRAE AMRAAVESAY DAKTPWTLDP VAVGALEFRR RFCLDLLSLR
PAAIRGNASE ILALSGMALG GRGVDTTEAA LAALPAAQAL ARQIDCIVVV TGEVDYVTNG
QRTLSIPGGD PLMTRIVGTG CALSAVVAAS CALPGAALDN VASACCWMKL AGQTAAERSE
GPGSFIPAFL DALYHLDVEA ANEEN
|
|---|
| |