Gene SeSA_A2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2339 
SymbolwcaI 
ID6518356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2211483 
End bp2212706 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content58% 
IMG OID642747402 
Productputative glycosyl transferase 
Protein accessionYP_002115195 
Protein GI194736458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TGGTCTATGG CATTAACTAT TCGCCGGAAC TGACCGGTAT CGGCAAATAT 
ACCGGCGAAA TGGTGGCGTG GATGGCGCGG GAAGGCCATG AGGTGCGGGT CATTACTGCG 
CCGCCGTACT ACCCGCAGTG GAAGGTCGGC GAGCGCTATT CCGCCTGGCG CTATCGCCGG 
GAAGAGGGCG AGGCTACCGT CTGGCGCTGC CCGCTGTATG TGCCGAAACA GCCCTCCACC 
TTAAAACGGT TGCTTCATCT GGGGAGCTTT GCATTGAGCA GTTTTTTCCC ACTGATGGCG 
CAGCGTCGCT GGAAGCCGGA TCGGATTATC GGCGTTGTAC CGACGCTCTT TTGTACGCCG 
GGAATGCGTC TGCTGGCGAC ACTCTCCGGC GCGCGTACCG TACTGCATAT TCAGGATTAC 
GAAGCGGACG CCATGCTCGG CTTAGGAATG GCGGGAAAAG GCAAGCGCGG CAGCGTAGCG 
CGGTTAGCGA CGGCCTTTGA ACGCAGCGCG CTGCGTAACG TTGATAATGT TTCGACCATC 
TCTCGCTCCA TGATGAATAA AGCGCGGGAA AAGGGCGTCG CGGCGGAAAA AATCCTCTTT 
TTTCCGAACT GGTCGGAAGT GGCGCGCTTT CAGGACGTTA ATGACGCTGA CGTGACGGCT 
TTGCGTCAGC AGCTTGGCTT GCCAGAGGGT AAAAAAATCG TGCTCTATTC CGGCAATATC 
GGCGAAAAGC AAGGGCTGGA AAAGGTGATA GACGCCGCGG AACGATTACG CGATCGACCG 
CTGATTTTCG CGATTGTCGG CCAGGGGGGC GGCAAGGCGC GGCTGGAGAA CATGGCCCGC 
GAACGCGGCC TGCCAAATAT TAAATTCCTC CCGCTGCAGC CTTACGACGC CTTACCCGCG 
CTGCTGAAAA TGGGCGACTG CCATCTGGTG GTGCAAAAGC GCGGCGCGGC GGATGCGGTA 
CTGCCCTCCA AGCTGACTAA CATTCTGGCG GTCGGCGGCA ATGCGGTAAT TACCGCTGAG 
CCGCACACCG AATTAGGACA ACTTTGCGCG CGTTATCCGG GCATCGCCGT TTGCGTGGAG 
CCGGAGTCAA CCGACGCGCT GGTCGACGGG ATTAGCCAGG CGCTCGCCAT GCCGAAAAAC 
AACACGACGG CACGTGAATA CGCCGAACGC ACGCTCAATA AAGAGAACGT GCTACGCCAA 
TTTATTGCAG ATATTCGGGG ATGA
 
Protein sequence
MKILVYGINY SPELTGIGKY TGEMVAWMAR EGHEVRVITA PPYYPQWKVG ERYSAWRYRR 
EEGEATVWRC PLYVPKQPST LKRLLHLGSF ALSSFFPLMA QRRWKPDRII GVVPTLFCTP 
GMRLLATLSG ARTVLHIQDY EADAMLGLGM AGKGKRGSVA RLATAFERSA LRNVDNVSTI 
SRSMMNKARE KGVAAEKILF FPNWSEVARF QDVNDADVTA LRQQLGLPEG KKIVLYSGNI 
GEKQGLEKVI DAAERLRDRP LIFAIVGQGG GKARLENMAR ERGLPNIKFL PLQPYDALPA 
LLKMGDCHLV VQKRGAADAV LPSKLTNILA VGGNAVITAE PHTELGQLCA RYPGIAVCVE 
PESTDALVDG ISQALAMPKN NTTAREYAER TLNKENVLRQ FIADIRG