Gene SeSA_A2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2329 
SymbolrfbD 
ID6517581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2198139 
End bp2199038 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content51% 
IMG OID642747392 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002115185 
Protein GI194734178 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.124762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCT TACTTTTTGG TAAGACAGGG CAAGTAGGCT GGGAGTTGCA ACGTTCTCTG 
GCACCAGTGG GGAATCTGAT TGCCCTGGAT GTCCATTCAA AAGAGTTTTG CGGTGATTTT
AGTAATCCGA AAGGCGTTGC TGAAACCGTT CGTAAGCTTC GTCCCGATGT GATTGTTAAC
GCAGCAGCCC ATACTGCAGT AGATAAAGCA GAGTCTGAAC CAGAACTAGC GCAGTTACTT
AACGCCACCA GTGTGGAAGC CATCGCTAAA GCGGCCAACG AAACTGGCGC ATGGGTAGTG
CATTATTCAA CCGATTATGT ATTTCCTGGT ACCGGCGATA TCCCATGGCA GGAAACGGAC
GCTACGTCGC CGCTGAATGT CTATGGCAAG ACCAAACTGG CGGGAGAAAA GGCCCTGCAG
GATAACTGCC CTAAGCACCT TATCTTCCGC ACCAGTTGGG TTTATGCAGG TAAGGGCAAT
AATTTCGCAA AGACAATGCT TCGTCTGGCG AAAGAGCGTC AGACACTTTC AGTCATCAAC
GATCAGTACG GTGCGCCAAC CGGTGCGGAA TTACTGGCTG ACTGCACGGC GCATGCGATC
CGTGTGGCGT TAAATAAACC AGAAGTCGCA GGTCTTTACC ATCTGGTTGC CGGGGGAACC
ACAACCTGGC ATGACTACGC GGCGTTAGTC TTTGACGAGG CACGCAAAGC AGGGATAACG
CTTGCGCTTA CGGAGCTTAA TGCTGTGCCG ACCAGCGCCT ACCCGACGCC GGCGAGCAGA
CCTGGAAATT CGCGTCTCAA TACTGAAAAG TTTCAGCGTA ATTTTGGCCT TATTCTGCCG
CAATGGGAAT TAGGAGTTAA GCGTATGCTG ACTGAAATGT TTACGACGAC ACCCATCTGA
 
Protein sequence
MNILLFGKTG QVGWELQRSL APVGNLIALD VHSKEFCGDF SNPKGVAETV RKLRPDVIVN 
AAAHTAVDKA ESEPELAQLL NATSVEAIAK AANETGAWVV HYSTDYVFPG TGDIPWQETD
ATSPLNVYGK TKLAGEKALQ DNCPKHLIFR TSWVYAGKGN NFAKTMLRLA KERQTLSVIN
DQYGAPTGAE LLADCTAHAI RVALNKPEVA GLYHLVAGGT TTWHDYAALV FDEARKAGIT
LALTELNAVP TSAYPTPASR PGNSRLNTEK FQRNFGLILP QWELGVKRML TEMFTTTPI