Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2329 |
Symbol | rfbD |
ID | 6517581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2198139 |
End bp | 2199038 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642747392 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_002115185 |
Protein GI | 194734178 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.124762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCT TACTTTTTGG TAAGACAGGG CAAGTAGGCT GGGAGTTGCA ACGTTCTCTG GCACCAGTGG GGAATCTGAT TGCCCTGGAT GTCCATTCAA AAGAGTTTTG CGGTGATTTT AGTAATCCGA AAGGCGTTGC TGAAACCGTT CGTAAGCTTC GTCCCGATGT GATTGTTAAC GCAGCAGCCC ATACTGCAGT AGATAAAGCA GAGTCTGAAC CAGAACTAGC GCAGTTACTT AACGCCACCA GTGTGGAAGC CATCGCTAAA GCGGCCAACG AAACTGGCGC ATGGGTAGTG CATTATTCAA CCGATTATGT ATTTCCTGGT ACCGGCGATA TCCCATGGCA GGAAACGGAC GCTACGTCGC CGCTGAATGT CTATGGCAAG ACCAAACTGG CGGGAGAAAA GGCCCTGCAG GATAACTGCC CTAAGCACCT TATCTTCCGC ACCAGTTGGG TTTATGCAGG TAAGGGCAAT AATTTCGCAA AGACAATGCT TCGTCTGGCG AAAGAGCGTC AGACACTTTC AGTCATCAAC GATCAGTACG GTGCGCCAAC CGGTGCGGAA TTACTGGCTG ACTGCACGGC GCATGCGATC CGTGTGGCGT TAAATAAACC AGAAGTCGCA GGTCTTTACC ATCTGGTTGC CGGGGGAACC ACAACCTGGC ATGACTACGC GGCGTTAGTC TTTGACGAGG CACGCAAAGC AGGGATAACG CTTGCGCTTA CGGAGCTTAA TGCTGTGCCG ACCAGCGCCT ACCCGACGCC GGCGAGCAGA CCTGGAAATT CGCGTCTCAA TACTGAAAAG TTTCAGCGTA ATTTTGGCCT TATTCTGCCG CAATGGGAAT TAGGAGTTAA GCGTATGCTG ACTGAAATGT TTACGACGAC ACCCATCTGA
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Protein sequence | MNILLFGKTG QVGWELQRSL APVGNLIALD VHSKEFCGDF SNPKGVAETV RKLRPDVIVN AAAHTAVDKA ESEPELAQLL NATSVEAIAK AANETGAWVV HYSTDYVFPG TGDIPWQETD ATSPLNVYGK TKLAGEKALQ DNCPKHLIFR TSWVYAGKGN NFAKTMLRLA KERQTLSVIN DQYGAPTGAE LLADCTAHAI RVALNKPEVA GLYHLVAGGT TTWHDYAALV FDEARKAGIT LALTELNAVP TSAYPTPASR PGNSRLNTEK FQRNFGLILP QWELGVKRML TEMFTTTPI
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