Gene SeSA_A2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2314 
Symbol 
ID6518262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2185516 
End bp2186577 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content34% 
IMG OID642747380 
Productprotein RfbU 
Protein accessionYP_002115173 
Protein GI194737305 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.742166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.00611992 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCGTTA ACCTATCACG TTTAGGTAAA AGTGGTACGG GAATGTGGCA ATACTCGATT 
AAATTTTTAA CGGCACTGCG AGAAATAGCT GATGTTGACG CAATAATCTG TAGCAAGGTA 
CACGCTGATT ATTTTGAAAA GCTCGGTTAT GCAGTAGTTA CTGTTCCGAA TATTGTTAGC 
AACACATCAA AAACATCGCG ACTTAGACCA TTAGTATGGT ATGCATATAG TTACTGGCTT 
GCGCTGAGGG TTTTAATTAA GTTTGGTAAT AAAAAATTGG TGTGTACTAC GCATCACACT 
ATTCCCTTAC TGAGAAACCA AACGATAACC GTACATGATA TAAGACCTTT TTATTATCCA 
GATAGTTTTA TTCAGAAAGT GTATTTTCGC TTTTTATTAA AAATGTCCGT TAAGCGATGT 
AAGCATGTTT TAACGGTATC TTATACCGTT AAAGATAGCA TTGCTAAAAC TTATAATGTA 
GATAGTGAGA AAATATCAGT AATTTATAAC AGCGTTAATA AATCTGATTT TATACAAAAA 
AAAGAAAAAG AGAATTACTT TTTAGCTGTT GGAGCAAGTT GGGCACATAA AAATATTCAT 
TCATTCATAA AAAATAAAAA AGTTTGGTCT GACTCTTATA ATTTAATTAT TGTATGTGGT 
CGTACTGACT ATGCAATGTC TCTCCAACAA ATGGTCGTTG ATCTGGAACT AACAGATAAA 
GTGATTTTTT TACATGAAGT CTCATTTAAT GAATTAAAAG TTCTATATTC TAAAGCCTAT 
GCGCTTGTTT ATCCATCTAT TGATGAGGGT TTTGGCATAC CTCCTATTGA AGCGATGGCA 
TCAAATACTC CAGTTATAGT GTCCGATATA CCAGTATTTC ATGAAGTGTT AACCAATGGT 
GCATTATATG TGAATCCGGA TGATGAAAAA AGCTGGCAGA GTGCAATTGA AAATATAGAG 
CAGTTGCCTG ATGCAATTTC CCGATTTAAC AACTATGTCG CACGGTATGA CTTTGATAAT 
ATGAAGCAGA TGGTTGGCAA TTGGTTGGCG GAATCAAAAT AA
 
Protein sequence
MIVNLSRLGK SGTGMWQYSI KFLTALREIA DVDAIICSKV HADYFEKLGY AVVTVPNIVS 
NTSKTSRLRP LVWYAYSYWL ALRVLIKFGN KKLVCTTHHT IPLLRNQTIT VHDIRPFYYP 
DSFIQKVYFR FLLKMSVKRC KHVLTVSYTV KDSIAKTYNV DSEKISVIYN SVNKSDFIQK 
KEKENYFLAV GASWAHKNIH SFIKNKKVWS DSYNLIIVCG RTDYAMSLQQ MVVDLELTDK 
VIFLHEVSFN ELKVLYSKAY ALVYPSIDEG FGIPPIEAMA SNTPVIVSDI PVFHEVLTNG 
ALYVNPDDEK SWQSAIENIE QLPDAISRFN NYVARYDFDN MKQMVGNWLA ESK