Gene SeSA_A2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2313 
Symbol 
ID6517605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2184571 
End bp2185515 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content38% 
IMG OID642747379 
Productputative O antigen biosynthesis rhamnosyltransferase 
Protein accessionYP_002115172 
Protein GI194736822 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0276977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA CATTAATTAT TCCCACATAT AATGCAGGGT CGCTTTGGCC TAATGTTCTG 
GATGCGATTA AGCAGCAAAC TATATATCCG GATAAATTGA TTGTTATAGA CTCAGGTTCT 
AAAGATGAAA CGGTTCCGTT AGCCTCAGAC CTGAAAAATA TATCAATATT TAATATTGAC 
TCTAAAGATT TTAATCATGG AGGAACCAGG AATTTAGCAG TTGCAAAAAC TCTGGACGCT 
GATGTTATAA TTTTTCTAAC GCAAGATGCA ATTCTTGCGG ATTCGGATGC AATTAAAAAT 
TTAGTTTATT ATTTTTCAGA TCCATTGATA GCAGCGGTTT GTGGTAGACA ACTTCCTCAT 
AAAGATGCTA ATCCTCTTGC AGTGCATGCC AGAAAATTTA ATTATAGTTC AAAATCTATT 
GTTAAAAGTA AGGCAGATAT AGAAAAATTG GGTATTAAAA CTGTATTTAT GTCCAATTCT 
TTTGCTGCCT ATCGCCGTTC CGTTTTTGAA GAGTTAAGTG GGTTTCCTGA ACATACAATT 
CTTGCCGAGG ATATGTTTAT GGCGGCTAAG ATGATTCAGG CGGGTTATAA GGTCGCCTAC 
TGCGCTGAAG CGGTGGTAAG ACACTCCCAT AATTATACCC CGCGAGAAGA GTTTCAACGA 
TATTTTGATA CTGGTGTATT TCATGCTTGT TCTCCGTGGA TTCAGCGTGA CTTTGGCGGA 
GCCGGTGGTG AGGGTTTCCG CTTCGTAAAA TCAGAGATTC AATTCCTGCT TAAAAATGCA 
CCGTTCTGGA TTCCAAGAGC GTTATTAACA ACTTTTGCTA AATTCCTGGG TTACAAATTA 
GGCAAGCATT GGCAATCTTT ACCGTTGTCT ACATGTCGCT ATTTTAGCAT GTACAAGAGT 
TATTGGAATA ATATCCAGTA TTCTTCGTCA AAAGAGATAA AATAA
 
Protein sequence
MKITLIIPTY NAGSLWPNVL DAIKQQTIYP DKLIVIDSGS KDETVPLASD LKNISIFNID 
SKDFNHGGTR NLAVAKTLDA DVIIFLTQDA ILADSDAIKN LVYYFSDPLI AAVCGRQLPH 
KDANPLAVHA RKFNYSSKSI VKSKADIEKL GIKTVFMSNS FAAYRRSVFE ELSGFPEHTI 
LAEDMFMAAK MIQAGYKVAY CAEAVVRHSH NYTPREEFQR YFDTGVFHAC SPWIQRDFGG 
AGGEGFRFVK SEIQFLLKNA PFWIPRALLT TFAKFLGYKL GKHWQSLPLS TCRYFSMYKS 
YWNNIQYSSS KEIK