Gene SeSA_A2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2292 
Symbol 
ID6515937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2162182 
End bp2163363 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content47% 
IMG OID642747359 
Productphage integrase family protein 
Protein accessionYP_002115152 
Protein GI194734635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.919949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.20238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA GTGACACTAA GCTTCGCTCT GTCTATGGTA AACCATATTC CGGCCCATCT 
GAAATTACTG ATTCTGATGG GTTGGGTATC CGTATTACTC CAAAGGGAAT CATTAGCTTC 
CAGTTCCGTT TTCGCTGGGA TGGGAAACAG CACCGCATGG GACTTGGTCG CTATCCTGCT 
CTCACTCTGC GTGACGCCCG TAACATAGTC GCAGATTTAA GAGAGTCCGT CGATAAAGGC 
ATTGATCCTC GTGAGCTTGC CGGAAACAAC AAGTCAAAGA AAAAACCAAC GGTAAAAGAC 
TGCCTGGATT ACTGGGAGGC AAACTATGTT AACGTGGCTT TGAGGGAAAA GACTAAGGCA 
CTTTACAGGT CGACGGTCAT AAAGCACATG AGTGATGCGT TCGCCGGTGT TCCGATTGAA 
GAAATTCCTG TTCGCCTGTG GGTTGAACGA TTTACTGACG AAGAGCGATT AAACCCACGC 
AGGGCTCGTC AGTTACTGGT ACAACTTCGG GCAGCTATTG GCTGGTGTAC ACGCAGACAA 
TTTATCAGCA CGGCTGATTT AATGCTGTTA CAGCCAAAAG ATGTGGGGAC AAAACCAACC 
GTGGGTGAGG TGACACTCAG TTATAATCAG CTTGCTAAAA TCTGGCTGGC GATAGAGCGT 
AGCAGAGGGT CAACGTCTAA CCGATTGCTC CATCAACTAC TGATGCTGTA TGGCGCAAGG 
AATAGCGAAC TTCGCCTGGC TGTTAAGGAG GAATTCGATC GTGAGGAGGG GATATGGACC 
GTACCCGCCG AAAAAAGTAA AACGAACAGA ATTATCAGAC GACCAATTTT TGACGCGGCC 
GATCAGTTGC TTAAAAAAGC AGAAATGACA TACGGGAATA TTCTTTTCCC TGGTCCGGAT 
CTGAAAAAGT CCATGACTAT TGCTGGTGCA AACAGATTTC TTGGAAGGAT AGAATCATCC 
CTGGGTATTG GCGAATTTTC CGCTCATGAT TTTCGGCGTA CACTGGCAAC CAGACTTTCA 
GAAGAAGGTA TAGCTCCGCA TGTTATTGAG AAAATGTTGG GGCATGAGCT GGGCGGCGTA 
CTTTCTGTTT ATAACAAACA TGACTGGATT GCTGAACAGA AAGCCGCCTA TGAGCTGTAC 
GCTGAAAAAA TATTCTGGCA TATCAGGAAG ATTTCTGGTT GA
 
Protein sequence
MAISDTKLRS VYGKPYSGPS EITDSDGLGI RITPKGIISF QFRFRWDGKQ HRMGLGRYPA 
LTLRDARNIV ADLRESVDKG IDPRELAGNN KSKKKPTVKD CLDYWEANYV NVALREKTKA 
LYRSTVIKHM SDAFAGVPIE EIPVRLWVER FTDEERLNPR RARQLLVQLR AAIGWCTRRQ 
FISTADLMLL QPKDVGTKPT VGEVTLSYNQ LAKIWLAIER SRGSTSNRLL HQLLMLYGAR 
NSELRLAVKE EFDREEGIWT VPAEKSKTNR IIRRPIFDAA DQLLKKAEMT YGNILFPGPD 
LKKSMTIAGA NRFLGRIESS LGIGEFSAHD FRRTLATRLS EEGIAPHVIE KMLGHELGGV 
LSVYNKHDWI AEQKAAYELY AEKIFWHIRK ISG