Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2210 |
Symbol | pduC |
ID | 6517154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 2097487 |
End bp | 2099151 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642747280 |
Product | propanediol utilization dehydratase, large subunit |
Protein accession | YP_002115073 |
Protein GI | 194735085 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4909] Propanediol dehydratase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.897937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCGA AAAGATTTGA AGCACTGGCG AAACGCCCTG TGAATCAGGA CGGCTTCGTT AAGGAGTGGA TCGAAGAAGG CTTTATCGCG ATGGAAAGCC CGAACGATCC AAAACCGTCG ATTAAAATCG TTAACGGCGC GGTGACCGAG CTGGACGGAA AACCGGTTAG CGAATTCGAC CTGATCGACC ACTTTATCGC TCGCTACGGC ATCAACCTGA ACCGCGCCGA AGAAGTGATG GCGATGGATT CGGTCAAGCT TGCCAATATG CTGTGCGATC CGAACGTCAA GCGCAGCGAA ATCGTTCCGC TGACCACCGC CATGACCCCG GCGAAAATTG TTGAAGTGGT TTCGCATATG AACGTGGTTG AGATGATGAT GGCGATGCAG AAAATGCGCG CCCGCCGCAC TCCATCTCAG CAGGCGCACG TCACCAACGT CAAGGATAAC CCGGTGCAAA TTGCCGCCGA TGCCGCCGAA GGCGCATGGC GCGGGTTTGA CGAACAAGAA ACCACGGTTG CGGTAGCACG CTACGCGCCG TTCAACGCCA TCGCGCTGTT GGTCGGTTCT CAGGTTGGTC GTCCGGGTGT ACTGACGCAG TGCTCGCTGG AAGAAGCCAC CGAGCTGAAG CTCGGCATGC TGGGCCACAC CTGCTACGCT GAAACCATCT CCGTTTACGG CACCGAGCCG GTCTTCACCG ACGGTGACGA TACGCCATGG TCGAAAGGCT TCTTAGCCTC TTCCTACGCC TCTCGCGGCC TGAAAATGCG CTTCACCTCC GGCTCCGGCT CCGAAGTGCA GATGGGCTAC GCCGAAGGCA AATCCATGCT GTATCTGGAA GCGCGCTGCA TCTATATCAC CAAAGCCGCG GGCGTTCAGG GGCTGCAAAA CGGCTCAGTA AGCTGCATCG GCGTACCGTC TGCCGTGCCG TCAGGCATTC GTGCCGTGCT GGCGGAAAAC CTGATCTGCT CGTCGCTGGA TCTGGAATGC GCCTCCAGTA ACGACCAGAC CTTCACCCAC TCCGATATGC GTCGTACCGC GCGCCTGCTG ATGCAGTTTC TGCCGGGTAC CGACTTTATC TCCTCTGGTT ATTCCGCGGT GCCGAACTAC GACAACATGT TCGCCGGTTC CAACGAAGAT GCGGAAGACT TTGACGACTA CAACGTTATC CAGCGTGACC TGAAAGTGGA CGGCGGTCTG CGCCCGGTTC GCGAAGAGGA CGTTATCGCC ATCCGTAACA AAGCCGCCCG CGCGCTGCAG GCCGTGTTTG CCGGAATGGG ACTACCGCCG ATTACCGATG AAGAAGTTGA AGCCGCGACC TATGCCCACG GTTCGAAAGA TATGCCGGAG CGTAACATCG TCGAAGACAT CAAGTTCGCC CAGGAAATCA TCAATAAAAA CCGCAACGGT CTGGAAGTCG TTAAAGCGCT GGCGCAGGGC GGGTTTACCG ACGTGGCCCA GGACATGCTC AACATCCAGA AAGCCAAGCT AACCGGCGAC TATTTGCACA CCTCCGCCAT TATCGTCGGC GACGGACAAG TGCTCTCTGC GGTTAATGAC GTCAATGACT ATGCCGGTCC GGCAACAGGT TATCGCCTGC AGGGAGAACG CTGGGAAGAG ATTAAAAATA TCCCTGGCGC TCTTGATCCC AACGAGATTG ATTAA
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Protein sequence | MRSKRFEALA KRPVNQDGFV KEWIEEGFIA MESPNDPKPS IKIVNGAVTE LDGKPVSEFD LIDHFIARYG INLNRAEEVM AMDSVKLANM LCDPNVKRSE IVPLTTAMTP AKIVEVVSHM NVVEMMMAMQ KMRARRTPSQ QAHVTNVKDN PVQIAADAAE GAWRGFDEQE TTVAVARYAP FNAIALLVGS QVGRPGVLTQ CSLEEATELK LGMLGHTCYA ETISVYGTEP VFTDGDDTPW SKGFLASSYA SRGLKMRFTS GSGSEVQMGY AEGKSMLYLE ARCIYITKAA GVQGLQNGSV SCIGVPSAVP SGIRAVLAEN LICSSLDLEC ASSNDQTFTH SDMRRTARLL MQFLPGTDFI SSGYSAVPNY DNMFAGSNED AEDFDDYNVI QRDLKVDGGL RPVREEDVIA IRNKAARALQ AVFAGMGLPP ITDEEVEAAT YAHGSKDMPE RNIVEDIKFA QEIINKNRNG LEVVKALAQG GFTDVAQDML NIQKAKLTGD YLHTSAIIVG DGQVLSAVND VNDYAGPATG YRLQGERWEE IKNIPGALDP NEID
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