| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2203 |
|---|
| Symbol | cobD |
|---|
| ID | 6518256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 2090995 |
|---|
| End bp | 2091954 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642747274 |
|---|
| Product | cobalamin biosynthesis protein |
|---|
| Protein accession | YP_002115067 |
|---|
| Protein GI | 194737481 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC TTGCCTGGTG TGTCGCCTGG GTGCTGGATT TTATCATCGG CGACCCTCAA
CACTGGCCCC ATCCGGTACG CTGGATAGGC CGTTTAATCA CGTTTGTGCA GCGTATTGTG
CGTCGCTATT GTCCCGGCGA TAAAGCGCTG CGGATTGGCG GCGGCGTAAT GTGGGTTGTG
GTTGTCGGGG CGACCTGGGG CGTGGCATGG GGCGTACTGG CGCTGGCGCA GCGGATTCAC
CCCTGGTTTG GCTGGAGCGT CGAAGTCTGG ATGATCTTTA CCACGCTGGC CGGACGCTCT
CTGGCCCGCG CCGCGCAGGA GGTTGAGCGA CCGTTGCGGG AGAACGACCT TGTGGAAAGC
CGAATAAAAC TCTCCTGGAT CGTCGGGCGC GATACGTCGC AACTTCAGCC AGCGCAGATC
AATCGCGCCG TGGTGGAAAC GGTTGCAGAA AATACCGTTG ACGGCATTAT CGCGCCGCTC
TTTTTCCTCT TTCTCGGCGG CGCGCCGCTG GCGATGGCCT ACAAAGCCGT CAATACCCTG
GATTCAATGG TGGGCTACAA ACATGAAAAA TACCGGGCGA TTGGTATGGT CAGCGCCCGT
ATGGACGACG TAGCGAACTA TCTTCCCGCC CGCCTGAGCT GGCTGTTGCT GGGCATTGCG
GCAGGACTGT GTCGCCTGAG TGGTTGGCGG GCGCTGCGTA TTGGCTGGCG TGACCGTTAT
AACCACAGTA GCCCAAATTG CGCCTGGTCG GAAGCGTGTG TGGCCGGCGC CTTAGGAATC
CAGCTCGGCG GCCCAAATAA CTACTTTGGC GAGCGTGTGG ACAAGCCCTG GATCGGCGAC
GCGCAGCGCG ATATTTCCGT GGACGATATT TCTCGAACGA TTCGATTGAT GTGGGTCGCT
TCAACCCTGG CGCTGGCGCT GTTTATTGCG GCGCGGTGCG GGTTATCTGG TGTGGCCTGA
|
|---|
| Protein sequence | MTILAWCVAW VLDFIIGDPQ HWPHPVRWIG RLITFVQRIV RRYCPGDKAL RIGGGVMWVV
VVGATWGVAW GVLALAQRIH PWFGWSVEVW MIFTTLAGRS LARAAQEVER PLRENDLVES
RIKLSWIVGR DTSQLQPAQI NRAVVETVAE NTVDGIIAPL FFLFLGGAPL AMAYKAVNTL
DSMVGYKHEK YRAIGMVSAR MDDVANYLPA RLSWLLLGIA AGLCRLSGWR ALRIGWRDRY
NHSSPNCAWS EACVAGALGI QLGGPNNYFG ERVDKPWIGD AQRDISVDDI SRTIRLMWVA
STLALALFIA ARCGLSGVA
|
|---|
| |