Gene SeSA_A2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2162 
Symbol 
ID6519997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2059525 
End bp2060322 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content51% 
IMG OID642747238 
Producthypothetical protein 
Protein accessionYP_002115035 
Protein GI194734800 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000383294 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.59755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGT GGCCCTGGAA AGCACAAGAA ATAACCCAGA ACGAAGACTG GCCGTGGAAT 
GATGCGCTGG CTATACCTCT TCTGGTAAAC CTCACCGCGC AAGAACAGGC TCGGCTTATT 
GCGCTAGCCG AACGTTTTTT GCAGCAGAAA AGACTGGTAG CGCTACAGGG ATTTGAGCTC 
GACTCGTTAA AAAGTGCACG TATTGCGTTA ATTTTTTGCT TACCGATCCT GGAGCTCGGT 
ATTGAGTGGC TTGATGGTTT TCATGAAGTG CTCATTTATC CCGCGCCCTT TGTGGTAGAT 
GATGAATGGG AAGATGACAT AGGTCTGGTG CACAGCCAGC GTGTCGTACA GTCGGGACAA 
AGCTGGCAAC AAGGGCCCAT CATTCTGAAC TGGCTGGATA TCCAGGACTC GTTCGATGCT 
TCAGGTTTCA ACCTCATTAT TCATGAAGTC GCGCACAAAC TGGATATGCG TAATGGCGAT 
CGCGCCAGCG GCATCCCTTT CATCCCGTTG CGCGATGTGG CTGGCTGGGA ACACGATCTC 
CACGCGGCAA TGAATAATAT TCAGGATGAA ATCGATCTTG TTGGCGAAAG CGCTGCCAGT 
ATAGATGCCT ATGCCGCCAC CGACCCTGCA GAATGTTTTG CCGTGTTGTC AGAGTATTTT 
TTCAGCGCGC CAGAACTGTT TGCTCCACGT TTCCCGGCGC TATGGCAGCG TTTTTGCCAG 
TTCTATCGCC AGGATCCTTC TCAGCGCTTA CGGGTAAACG CTGCCGAAGG CGACTACGGC 
GAGGAATCCG AACATTAA
 
Protein sequence
MIKWPWKAQE ITQNEDWPWN DALAIPLLVN LTAQEQARLI ALAERFLQQK RLVALQGFEL 
DSLKSARIAL IFCLPILELG IEWLDGFHEV LIYPAPFVVD DEWEDDIGLV HSQRVVQSGQ 
SWQQGPIILN WLDIQDSFDA SGFNLIIHEV AHKLDMRNGD RASGIPFIPL RDVAGWEHDL 
HAAMNNIQDE IDLVGESAAS IDAYAATDPA ECFAVLSEYF FSAPELFAPR FPALWQRFCQ 
FYRQDPSQRL RVNAAEGDYG EESEH