| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2141 |
|---|
| Symbol | rcsA |
|---|
| ID | 6516491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 2044594 |
|---|
| End bp | 2045217 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642747219 |
|---|
| Product | colanic acid capsular biosynthesis activation protein A |
|---|
| Protein accession | YP_002115017 |
|---|
| Protein GI | 194735620 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000944438 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.224442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACGA TTATTATGGA TTTATGCAGT TACACCCGGC TAGGGTTAAG CGGGTATCTG
GTCAGCAGAG GGGTGAAAAG AAGGGAAATC AACGACATCG AAACCGTTGA CGAACTCGCT
ATCGCTTGTG GCGCGCATCA GCCTTCGGTG GTGTTTATTA ATGAGGACTG TTTCATCCAT
ACGCCTTCAG ACAGTCAACA AATAAAGCAA ATCATTAATC AACATCCTGA CACTTTATTT
ATTGTTTTTA TGGCAATTGC TAATGTGCAT TTTGATGAAT ATTTATTAGT AAGAAAAAAC
TTATTGATTA GCTCAAAATC GATTAAACCT GACTCGCTGG ATACCATTCT TGGCGATATT
CTGAAAAAAG AGTCGGGTAT TTCAGGAACC ATAAATTTAC CAACATTATC GTTAAGTCGA
ACTGAATCCA GCATGTTGCG AATGTGGATG GAAGGTCAGG GAACCATTCA GATTTCTGAC
AGAATGAATA TTAAAGCAAA AACAGTATCC TCCCATAAGG GGAATATAAA AAGAAAGATA
AAAACGCATA ATAAACAAGT TATCTATCAT GTAGTACGGC TGACAGATAA CGTCACTAAC
GGCATTTTTG TTAACATGCG CTGA
|
|---|
| Protein sequence | MSTIIMDLCS YTRLGLSGYL VSRGVKRREI NDIETVDELA IACGAHQPSV VFINEDCFIH
TPSDSQQIKQ IINQHPDTLF IVFMAIANVH FDEYLLVRKN LLISSKSIKP DSLDTILGDI
LKKESGISGT INLPTLSLSR TESSMLRMWM EGQGTIQISD RMNIKAKTVS SHKGNIKRKI
KTHNKQVIYH VVRLTDNVTN GIFVNMR
|
|---|
| |