| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2109 |
|---|
| Symbol | |
|---|
| ID | 6516704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 2019900 |
|---|
| End bp | 2020886 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642747188 |
|---|
| Product | D-cysteine desulfhydrase |
|---|
| Protein accession | YP_002114986 |
|---|
| Protein GI | 194736078 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.497431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0120182 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTAC ATCACTTAAC GCGCTTCCCT CGCCTGGAGC TTATCGGCGC GCCGACCCCG
CTCGAATACC TGCCGCGATT GTCTGATTAT CTTGGCCGTG AGATTTACAT TAAGCGCGAT
GACGTTACGC CCATTGCAAT GGGCGGCAAT AAACTGCGCA AGCTGGAGTT TCTGGTGGCC
GACGCGCTGC GAGAAGGGGC GGATACGCTG ATAACCGCAG GGGCGATTCA GTCGAACCAT
GTCCGTCAGA CGGCGGCGGT CGCGGCCAAA TTGGGGCTGC ATTGCGTCGC CTTGCTGGAA
AATCCAATCG GTACCACTGC GGAAAATTAC CTGACGAATG GTAATCGCCT GTTACTGGAT
TTATTTAATA CGCAAATTGA GATGTGCGAT GCGCTGACCG ATCCGGATGC GCAGCTGCAA
ACGCTGGCGA CGCGCATTGA AGCGCAAGGG TTCAGGCCCT ATGTGATTCC GGTCGGCGGC
TCCAGCGCGC TGGGCGCAAT GGGATACGTA GAGAGCGCCC TGGAAATCGC CCAGCAGTGT
GAAGAGGTCG TCGGGCTCTC TTCGGTGGTG GTGGCCTCCG GCAGCGCCGG AACGCACGCC
GGGTTAGCTG TCGGGCTGGA ACATCTGATG CCGGATGTCG AACTAATTGG CGTGACCGTT
TCACGTGCTG TCGCCGAGCA GAAACCCAAA GTAATTGCCT TGCAGCAGGC TATTGCCGGT
CAGCTGGCGC TGACGGCGAC GGCGGATATT CATTTATGGG ATGACTATTT TGCCCCGGGT
TACGGCGTGC CAAATGACGC GGGGATGGAG GCGGTGAAAC TGCTGGCGAG CCTGGAGGGA
GTGCTGCTGG ATCCGGTATA TACCGGTAAA GCGATGGCGG GTCTGATAGA CGGCATCAGC
CAGAAACGCT TTAACGATGA CGGGCCGATT CTCTTTATTC ACACCGGTGG GGCGCCTGCG
CTGTTTGCCT ACCATCCTCA TGTATAA
|
|---|
| Protein sequence | MPLHHLTRFP RLELIGAPTP LEYLPRLSDY LGREIYIKRD DVTPIAMGGN KLRKLEFLVA
DALREGADTL ITAGAIQSNH VRQTAAVAAK LGLHCVALLE NPIGTTAENY LTNGNRLLLD
LFNTQIEMCD ALTDPDAQLQ TLATRIEAQG FRPYVIPVGG SSALGAMGYV ESALEIAQQC
EEVVGLSSVV VASGSAGTHA GLAVGLEHLM PDVELIGVTV SRAVAEQKPK VIALQQAIAG
QLALTATADI HLWDDYFAPG YGVPNDAGME AVKLLASLEG VLLDPVYTGK AMAGLIDGIS
QKRFNDDGPI LFIHTGGAPA LFAYHPHV
|
|---|
| |