Gene SeSA_A2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2108 
Symbol 
ID6515852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2019211 
End bp2019879 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content55% 
IMG OID642747187 
Productamino acid ABC transporter His/Glu/Gln/Arg/opine family, permease 
Protein accessionYP_002114985 
Protein GI194735316 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0113123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA GTATCCAACT GGTTATTGAA TCGCTGCCGT ATTTGCTTAA AGGCGCCGTC 
TTTACCCTGC AACTGAGTAT TGGCGGTATG TTTTTTGGTC TGCTGCTGGG ATTTGTGCTG
GCGCTGATGC GGATGTCTCC GCTATGGCCG GTTCGCTGGC TGGCGCGCTT TTATATCTCG
ATTTTTCGCG GTACGCCGCT TATCGCCCAG TTATTTATGA TCTATTACGG CCTGCCGCAA
TTTGGGATTG AGCTGGACCC TATCCCGGCG GCGATGATTG GTTTATCGCT CAATACCGCG
GCTTACACGT CCGAGACGCT GCGCGCGGCG ATCTCGGCTA TCGACAAGGG ACAATGGGAA
GCGGCGGCGA GCATTGGCAT GACGCCGTGG CAAACGCTAC GTCGCGCTAT TTTGCCGCAG
GCGGCTCGTG TCGCGCTTCC GCCGTTGAGC AACAGCTTTA TCAGCCTGGT GAAAGATACG
TCGCTCGCCG CGACGATTCA GGTGCCGGAG TTGTTCCGCC AGGCGCAGTT AATTACCTCG
CGAACGCTGG AGGTGTTTAC CATGTATCTG GCCGCGTCGT TAATCTACTG GGTAATGGCG
ACCGTCTTAT CGGCACTGCA AAACTATTTT GAAAACCAGC TTAACCGCCA GGAGAGAGAG
CCAAAATGA
 
Protein sequence
MQESIQLVIE SLPYLLKGAV FTLQLSIGGM FFGLLLGFVL ALMRMSPLWP VRWLARFYIS 
IFRGTPLIAQ LFMIYYGLPQ FGIELDPIPA AMIGLSLNTA AYTSETLRAA ISAIDKGQWE
AAASIGMTPW QTLRRAILPQ AARVALPPLS NSFISLVKDT SLAATIQVPE LFRQAQLITS
RTLEVFTMYL AASLIYWVMA TVLSALQNYF ENQLNRQERE PK