Gene SeSA_A2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2107 
Symbol 
ID6517298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2018462 
End bp2019214 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content55% 
IMG OID642747186 
Productputative amino-acid ABC transporter ATP-binding protein YecC 
Protein accessionYP_002114984 
Protein GI194734491 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0110609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGA TCGAAGTCAC CAACCTGGTC AAAAAATTTC ATGGTCAAAC GGTGCTGCAC 
GGTATCGACC TTGAGGTGAA GCCCGGAGAA GTCGTCGCCA TTATCGGCCC GAGCGGCTCA
GGGAAAACAA CGTTATTACG CTGCATTAAC CTGCTGGAAC AACCGGAAGC GGGCACCATT
AAAGTGGGCG ATATTATCAT CGATACCGCC CGCCCATTCA GCCAGCAAAA AGGGTTGATT
CGCCAGCTAC GTCAGCATGT CGGCTTTGTC TTTCAGAGTT TTAACCTGTT CCCGCATCGT
ACCGTGCTGG AAAATATCAT TGAAGGTCCG GTGATTGTAA AGGGAGAGCC GAAAGCCGAG
GCGACGGCGC TGGCGCGGGA ACTGTTAGCC AAAGTCGGGT TGGCTGGTAA AGAGACCCGT
TATCCGCGCC GCCTGTCGGG CGGGCAACAG CAGCGCGTGG CGATTGCGCG TGCGCTGGCG
ATGCGCCCGG AAGTGATTCT GTTTGATGAG CCCACGTCGG CGCTTGATCC TGAATTAGTC
GGCGAGGTGC TTAATACAAT TCGCCAGCTG GCGCAGGAAA AGCGCACGAT GGTGATCGTC
ACTCACGAAA TGGGCTTTGC GCGTGACGTG GCTGACCGGG CAATATTTAT GGATCAGGGG
CAAATCGTTG AGCAGGGGCC GGCGAAAACC TTGTTCGCCG ATCCTCAGCA TCCGCGTACC
CGCCAGTTCC TTGAGAAATT TTTAGTGAAA TAA
 
Protein sequence
MSAIEVTNLV KKFHGQTVLH GIDLEVKPGE VVAIIGPSGS GKTTLLRCIN LLEQPEAGTI 
KVGDIIIDTA RPFSQQKGLI RQLRQHVGFV FQSFNLFPHR TVLENIIEGP VIVKGEPKAE
ATALARELLA KVGLAGKETR YPRRLSGGQQ QRVAIARALA MRPEVILFDE PTSALDPELV
GEVLNTIRQL AQEKRTMVIV THEMGFARDV ADRAIFMDQG QIVEQGPAKT LFADPQHPRT
RQFLEKFLVK